Information on SUBCLASS 2.9.2 |
Subclass Accession number: 179
Subclass: 2.9.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.8 (>75 %) 3.4 (>75 %) 3.4.22 (>75 %) GO : GO:0003723 (>75 %) GO:0004175 (>50 %) GO:0004197 (>50 %) GO:0008233 (>50 %) GO:0008234 (>50 %) GO:0016782 (>75 %) SCOP : 54000 (>75 %) 54001 (>75 %) 54002 (>75 %) 54861 (>75 %) 54928 (>75 %) 54929 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 31.5 +/- 18.0 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | pXGpIX |
(φψ)-conformation: | aaeppa |
Pattern: | [EK] | [DEK] | [EQS] | [IL] | [HQY] | [AE] | [IKL] | [F] | [CS] | [DKR] | x | [G] | [DEQ] | [I] | [KL] | [DKN] | [I] | [HIL] |
Conservation: | 0.284 | -0.301 | -0.450 | 0.251 | -0.153 | -0.449 | -1.265 | 2.218 | -0.219 | -0.746 | -0.672 | 2.218 | -0.005 | 0.884 | -0.766 | -0.524 | 0.884 | -1.191 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h6k_X_53 | 1h6k | X | 53 | 70 | EEQIYELFSKSGDIKKII | HHHHHHHHGGGS-EEEEE | aaaaaaaaaaaexxabbb |
1nu4_A_23 | 1nu4 | A | 27 | 44 | KKSLHAIFSRFGQILDIL | HHHHHHHHGGGS-EEEEE | aaaaaaaaaaaexxabbb |
1oo0_B_86 | 1oo0 | B | 86 | 103 | EDEIQEKFCDYGEIKNIH | HHHHHHHHGGGS-EEEEE | aaaaaaaaaaaexxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | K - 23 |
1nu4_A_23 | 1nu4 | A | MGMAGNESIUM ION | K - 27 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | K - 27 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | H - 31 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | Q - 39 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | I - 40 |
1nu4_A_23 | 1nu4 | A | MGMAGNESIUM ION | L - 41 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | L - 41 |
1nu4_A_23 | 1nu4 | A | MGMAGNESIUM ION | D - 42 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | D - 42 |
1nu4_A_23 | 1nu4 | A | MGMAGNESIUM ION | I - 43 |
1nu4_A_23 | 1nu4 | A | MLAMALONIC ACID | I - 43 |
1nu4_A_23 | 1nu4 | A | MGMAGNESIUM ION | L - 44 |
Clusters included in this Subclass |
CLUSTER: HE.4.201 |