Information on SUBCLASS 3.3.2 |
Subclass Accession number: 205
Subclass: 3.3.2 ![]() Type: HE alpha-beta DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 15 Average sequence ID (%) : 10.0 +/- 12.8 Average RMSD (Å) : 0.660 +/- 0.235 Consensus geometry
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Consensus Sequence: | XXpXXhp |
(φψ)-conformation: | aapaabb |
Pattern: | x | x | x | [AFGILMPVWY] | x | [egknqr] | [dehnqs] | [dekpqs] | [aeknqs] | [CFGILVY] | [dehkrt] | [acgikltv] | x |
Conservation: | 0.258 | -0.375 | -1.519 | -0.736 | -1.058 | 0.743 | 1.424 | 1.197 | 0.160 | 0.889 | 0.897 | -1.400 | -0.480 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bjn_A_261 | 1bjn | A | 277 | 287 | YGVIDNSDFYR.. | HHHHHH-SSEE.. | aaaaaabaabb.. |
1bob_*_231 | 1bob | - | 240 | 252 | IQSWLEDKSITEI | HHHHHH-TTEEEE | aaaaaaxaaxabb |
1c0a_A_305 | 1c0a | A | 307 | 319 | FAGPANDPKGRVA | HHHHHH-TTEEEE | aaaaaaxaaxbbb |
1chu_A_145 | 1chu | A | 145 | 157 | VSKALNHPNIRVL | HHHHHH-TTEEEE | aaaaaaxaabbbx |
1f1z_A_61 | 1f1z | A | 67 | 79 | FLSLEWESSVLDI | HHHHHH-TTEEEE | aaaaaaxaaxabb |
1h1d_A_177 | 1h1d | A | 180 | 192 | LAYVRGSSSFECT | HHHHHH-TTEEEE | aaaaaaxaabbbb |
1ju3_A_90 | 1ju3 | A | 98 | 110 | LSWILEQAWCDGN | HHHHHHSTTEEEE | aaaaaaxaabavb |
1lc0_A_58 | 1lc0 | A | 58 | 70 | LEDALRSQEIDVA | HHHHHH-SSEEEE | aaaaaapaaxabb |
1m6y_A_246 | 1m6y | A | 253 | 264 | KETFRNSKKLRI. | HHHHHH-SSEEE. | aaaaaaxaabbx. |
1mg7_A_280 | 1mg7 | A | 290 | 302 | EKLMNEHEQVEGF | HHHHHH-TTEEEE | aaaaaabaaxabb |
1q8f_A_14 | 1q8f | A | 20 | 32 | IMMAAKHPAIDLL | HHHHHH-TTEEEE | aaaaaaxaabbxa |
1qo7_A_193 | 1qo7 | A | 199 | 211 | RLLGVGFDACKAV | HHHHHH-TTEEEE | aaaaaabaaxabb |
1rlr_*_372 | 1rlr | - | 379 | 391 | YTKYEKDDSIRKQ | HHHHHH-TTS-EE | aaaaaapaaxxbb |
1uiu_A_226 | 1uiu | A | 229 | 241 | FARFSQNPAYHTQ | HHHHHH-TTSEEE | aaaaaaxaabxbb |
2mas_A_13 | 2mas | A | 19 | 31 | ILLAHGNPEIELL | HHHHHH-TTEEEE | aaaaaaxaaxbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bob_*_231 | 1bob | * | ACOACETYL COENZYME *A | H - 231 |
1bob_*_231 | 1bob | * | ACOACETYL COENZYME *A | G - 232 |
1bob_*_231 | 1bob | * | ACOACETYL COENZYME *A | S - 233 |
1bob_*_231 | 1bob | * | ACOACETYL COENZYME *A | V - 254 |
1c0a_A_305 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | V - 306 |
1c0a_A_305 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | F - 307 |
1f1z_A_61 | 1f1z | A | MGMAGNESIUM ION | E - 63 |
1f1z_A_61 | 1f1z | A | MGMAGNESIUM ION | Q - 82 |
1q8f_A_14 | 1q8f | A | CACALCIUM ION | D - 15 |
1q8f_A_14 | 1q8f | A | GOLGLYCEROL | D - 15 |
1q8f_A_14 | 1q8f | A | CACALCIUM ION | D - 16 |
1q8f_A_14 | 1q8f | A | GOLGLYCEROL | D - 16 |
2mas_A_13 | 2mas | A | PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL | D - 14 |
2mas_A_13 | 2mas | A | CACALCIUM ION | D - 14 |
2mas_A_13 | 2mas | A | PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL | D - 15 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2mas_A_13 | 2mas | A | S1DESCRIPTION NOT PROVIDED | D - 15 |
Clusters included in this Subclass |
CLUSTER: HE.2.28 |
CLUSTER: HE.3.41 |
CLUSTER: HE.4.46 |