Information on SUBCLASS 5.4.4 |
Subclass Accession number: 2448
Subclass: 5.4.4 ![]() Type: HH alpha-alpha DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 15.4 +/- 15.0 Average RMSD (Å) : 0.800 +/- 0.300 Consensus geometry
|
Consensus Sequence: | XpXXpLppX |
(φψ)-conformation: | aapaappaa |
Pattern: | [AEK] | x | [IL] | [AST] | x | [AT] | [FGL] | [ER] | [EKL] | [IL] | x | [NST] | x | [DP] | [ENR] | [L] | [NST] | [DE] | [DEP] | x | [IK] | [IK] | [AK] | [AFV] | [ILV] | [EFQ] |
Conservation: | -0.425 | -1.127 | 1.152 | 0.075 | -0.826 | 0.439 | -1.427 | 0.840 | -1.027 | 1.152 | -1.127 | 0.276 | -1.327 | 1.310 | -0.025 | 1.979 | 0.276 | 2.013 | 0.176 | -0.826 | -0.543 | -0.493 | 0.362 | -0.826 | 0.777 | -0.826 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jqn_A_102 | 1jqn | A | 102 | 127 | EVIARTLRKLKNQPELSEDTIKKAVE | HHHHHHHHHHHT-TT--HHHHHHHHH | aaaaaaaaaaaaxaaxxaaaaaaaaa |
1lp1_A_5 | 1lp1 | A | 7 | 32 | KELSVAGREIVTLPNLNDPQKKAFIF | HHHHHHHHHHHT-TTS-HHHHHHHHH | aaaaaaaaaaaaxaaxxaaaaaaaaa |
1rtr_A_105 | 1rtr | A | 114 | 139 | ALLTKAFELISSDDRLTDEVKIKVLQ | HHHHHHHHHHHT-TTS-HHHHHHHHH | aaaaaaaaaaaaxaabxaaaaaaaaa |
Clusters included in this Subclass |
CLUSTER: HH.5.188 |
CLUSTER: HH.6.86 |