Information on SUBCLASS 4.2.7 |
Subclass Accession number: 3882
Subclass: 4.2.7 ![]() Type: AR beta-beta link DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 12.5 +/- 14.7 Average RMSD (Å) : 0.660 +/- 0.182 Consensus geometry
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Consensus Sequence: | phpXGpph |
(φψ)-conformation: | bbpplpbb |
Pattern: | x | [AFIL] | [EGNST] | [dnpq] | [GN] | [DET] | x | [FIVY] |
Conservation: | -0.956 | -0.304 | -0.243 | -0.897 | 2.104 | 0.450 | -0.570 | 0.416 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i5p_A_588 | 1i5p | A | 596 | 603 | VASDNTNV | EE-TTSEE | bxpxlbxx |
1i5z_A_58 | 1i5z | A | 63 | 70 | YLNQGDFI | EE-TT-EE | bbbpvxxb |
1jj2_J_46 | 1jj2 | J | 46 | 53 | KAGLGDKI | EE-TT-EE | bbbpvxxb |
1o75_A_382 | 1o75 | A | 389 | 396 | DFTPGTEY | EE-TT-EE | bxxpgxxb |
1oxx_K_18 | 1oxx | K | 27 | 34 | NIENGERF | EE-TT-EE | bxxpvxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | E - 58 |
1i5z_A_58 | 1i5z | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | M - 59 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | M - 59 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 61 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | S - 62 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 64 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | F - 69 |
1i5z_A_58 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | I - 70 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | V - 18 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | A - 20 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | D - 22 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | N - 23 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | V - 24 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | N - 25 |
1oxx_K_18 | 1oxx | K | IODIODIDE ION | I - 26 |
Clusters included in this Subclass |
CLUSTER: AR.3.140 |