Information on SUBCLASS 2.1.29 |
Subclass Accession number: 4529
Subclass: 2.1.29 ![]() Type: HH alpha-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 4 Average sequence ID (%) : 12.2 +/- 12.1 Average RMSD (Å) : 0.650 +/- 0.238 Consensus geometry
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Consensus Sequence: | XpXphX |
(φψ)-conformation: | aappaa |
Pattern: | [DEKY] | x | x | x | x | x | [ILMV] | x | x | [KLM] | [QST] | x | x | [AE] | x |
Conservation: | -0.211 | -0.895 | -0.314 | -1.275 | -0.804 | -1.123 | 1.612 | -0.439 | -0.135 | 0.577 | 0.880 | -0.145 | -0.743 | 2.000 | 1.016 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kgn_A_189 | 1kgn | A | 211 | 225 | YKYQQGVKKLSEAEQ | HHHHHHHTTS-HHHH | aaaaaaaaabxaaaa |
1knx_A_58 | 1knx | A | 58 | 72 | KREFGFLSQKTLVEQ | HHHHHHHTTS-HHHH | aaaaaaaaNxxaaaa |
1n69_A_43 | 1n69 | A | 56 | 70 | EIAIQMMMHMQPKEI | HHHHHHHTTS-HHHH | aaaaaaaaabxaaaa |
1ogs_A_87 | 1ogs | A | 87 | 101 | DAAALNILALSPPAQ | HHHHHHHTTS-HHHH | aaaaaaaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kgn_A_189 | 1kgn | A | FEFE (III) ION | I - 198 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | I - 198 |
1kgn_A_189 | 1kgn | A | FEFE (III) ION | D - 201 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | D - 201 |
1kgn_A_189 | 1kgn | A | FEFE (III) ION | E - 202 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | E - 202 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | S - 203 |
1kgn_A_189 | 1kgn | A | FEFE (III) ION | H - 205 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | H - 205 |
1kgn_A_189 | 1kgn | A | FEFE (III) ION | G - 206 |
1kgn_A_189 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | G - 206 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | M - 43 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | A - 44 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | I - 46 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | C - 47 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | Y - 50 |
1n69_A_43 | 1n69 | A | PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE | I - 51 |
Clusters included in this Subclass |
CLUSTER: HH.5.142 |