Information on SUBCLASS 4.34.2 |
Subclass Accession number: 5690
Subclass: 4.34.2 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 4 Average sequence ID (%) : 9.4 +/- 10.9 Average RMSD (Å) : 1.125 +/- 0.171 Consensus geometry
|
Consensus Sequence: | XhXphXXX |
(φψ)-conformation: | aabappbb |
Pattern: | [KQW] | x | [TV] | x | x | [ATV] | x | [ESW] | x | x | [DNSY] | [GLV] | [GPT] | x | [CERT] | x |
Conservation: | 1.253 | -0.696 | 2.264 | -0.995 | 0.105 | 1.444 | -0.080 | 0.354 | -0.895 | -0.597 | -0.000 | -0.751 | 0.980 | -0.696 | -0.895 | -0.796 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bif_*_304 | 1bif | - | 304 | 319 | KRTIQTAEALSVPYEQ | HHHHHHHTTSSS--EE | aaaaaaaaaxaxwbbx |
1f6y_A_53 | 1f6y | A | 59 | 74 | WLVEVTQEVSNLTLCL | HHHHHHHTT--SEEEE | aaaaaaaaabaxpbbx |
1hk8_A_105 | 1hk8 | A | 114 | 129 | QITAQVASHQYGGTTF | HHHHHHHTTSSS-EEE | aaaaaaaaababxbbb |
1qmh_A_99 | 1qmh | A | 104 | 119 | QTVLPALWFADGPSRV | HHHHHHHTTSSS-EEE | aaaaaaaaaxabwbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bif_*_304 | 1bif | * | PO4PHOSPHATE ION | R - 305 |
1hk8_A_105 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | G - 106 |
1hk8_A_105 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | V - 107 |
1hk8_A_105 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | A - 110 |
1hk8_A_105 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | I - 111 |
1hk8_A_105 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | Q - 114 |
1qmh_A_99 | 1qmh | A | CITCITRIC ACID | L - 101 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hk8_A_105 | 1hk8 | A | DG1DGT BINDING SITE FOR CHAIN A | I - 111 |
Clusters included in this Subclass |
CLUSTER: HE.6.122 |
CLUSTER: HE.7.186 |