Information on SUBCLASS 4.14.1 |
Subclass Accession number: 6299
Subclass: 4.14.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 18.5 +/- 21.5 Average RMSD (Å) : 0.618 +/- 0.204 Consensus geometry
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Consensus Sequence: | hcXcpGXX |
(φψ)-conformation: | bbagaebb |
Pattern: | x | x | x | x | [dnst] | x | [gns] | x | [eg] | x | x | x | x |
Conservation: | -0.631 | -0.415 | -0.736 | -0.180 | 1.012 | -0.493 | 1.740 | -0.377 | 2.265 | -0.690 | -0.578 | -0.289 | -0.628 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dcu_A_196 | 1dcu | A | 197 | 209 | IFVLTIGKGVFVF | EEEEESSS-EEEE | bbbbbavaexbbb |
1gxu_A_37 | 1gxu | A | 37 | 49 | GDVCNDGDGVEVR | EEEEE-SSSEEEE | ebbbbavaebbbb |
1gzd_A_40 | 1gzd | A | 40 | 52 | SLNLNTNHGRILL | EEEEE-SS-EEEE | bbbbbavaebbxb |
1iat_A_40 | 1iat | A | 40 | 52 | SLTLNTNHGHILV | EEEEE-SS-EEEE | bbbbbavaebbxb |
1kuu_A_182 | 1kuu | A | 186 | 198 | AAAFNDGEGWNLA | EEEEESSS-EEEE | bbbbbagaexbbb |
1lp8_A_224 | 1lp8 | A | 226 | 238 | NKDYDFGFGKVRQ | EEEEESSS-EEEE | abxbbagaexbab |
1okq_A_2818 | 1okq | A | 2820 | 2832 | YFSYDLGSGDTST | EEEEE-SS-EEEE | bbbbbaNaexbbb |
1okq_A_2992 | 1okq | A | 2994 | 3006 | MFHVDNGAGRFTA | EEEEESSS-EEEE | bbxbbagaexbbb |
1qi7_A_223 | 1qi7 | A | 225 | 237 | NKDYDFGFGKVRQ | EEEEESSSSEEEE | abxbbagaexbax |
1qus_A_311 | 1qus | A | 314 | 326 | LLRLDVGTGYQYW | EEEEE-SSSEEEE | bbbbxaGaebbxb |
1qy5_A_221 | 1qy5 | A | 221 | 233 | HIWESDSNEFSVI | EEEEE-SS-EEEE | bbbbbavaebbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gxu_A_37 | 1gxu | A | CPPHOSPHORIC ACID MONO(FORMAMIDE)ESTER | N - 41 |
1gxu_A_37 | 1gxu | A | CPPHOSPHORIC ACID MONO(FORMAMIDE)ESTER | V - 46 |
1okq_A_2992 | 1okq | A | CACALCIUM ION | D - 2998 |
1okq_A_2992 | 1okq | A | CACALCIUM ION | N - 2999 |
1okq_A_2992 | 1okq | A | CACALCIUM ION | G - 3000 |
1qy5_A_221 | 1qy5 | A | M2M1-METHOXY-2-(2-METHOXYETHOXY)ETHANE | S - 227 |
1qy5_A_221 | 1qy5 | A | M2M1-METHOXY-2-(2-METHOXYETHOXY)ETHANE | N - 228 |
Clusters included in this Subclass |
CLUSTER: HA.3.188 |
CLUSTER: HA.5.65 |