Information on SUBCLASS 4.4.2 |
Subclass Accession number: 1798
Subclass: 4.4.2 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.1 GO : GO:0004553 (>75 %) GO:0016160 (>75 %) GO:0016798 (>75 %) SCOP : 51010 (>75 %) 51011 (>75 %) 51012 (>75 %) 51268 (>75 %) |
Number of loops: 12 Average sequence ID (%) : 20.0 +/- 19.9 Average RMSD (Å) : 0.425 +/- 0.245 Consensus geometry
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Consensus Sequence: | phpXcpXh |
(φψ)-conformation: | bbppgppa |
Pattern: | x | [ekrst] | [AILV] | [ehknqrty] | [dekpr] | [gnr] | [ADEKQT] | x | [FILVW] |
Conservation: | -1.000 | -0.882 | 1.345 | -0.703 | -0.362 | 1.230 | -0.163 | -1.267 | 0.802 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bdo_*_108 | 1bdo | - | 108 | 115 | .KVNVGDTL | .EE-TT-EE | .xbbpvxxa |
1brw_A_387 | 1brw | A | 387 | 394 | .RVQKGEAL | .EE-TT-EE | .xbbpvxxa |
1euw_A_109 | 1euw | A | 109 | 117 | FTIQPGERI | EEE-TT-EE | bbxxpvxxa |
1f7d_A_90 | 1f7d | A | 90 | 98 | ITLMERQKI | EEE-TT-EE | bbxxpvxxa |
1htp_*_49 | 1htp | - | 49 | 56 | .SVTKGKGF | .EE-BTSEE | .xbbpvbxa |
1je5_A_11 | 1je5 | A | 11 | 19 | GTAEPYAYI | EEE-SS-EE | bbxxxvxba |
1pkh_A_153 | 1pkh | A | 153 | 161 | VILYKNQRI | EEEETT-EE | bxbbpvxxa |
1q5h_A_98 | 1q5h | A | 98 | 106 | FEVKKGDRI | EEE-TT-EE | bbbbpvxxa |
1qpo_A_72 | 1qpo | A | 76 | 84 | DRVEDGARV | EE--TT-EE | bbbxpgxxb |
1six_A_103 | 1six | A | 103 | 111 | IVVHRGDRI | EEE-TT-EE | bbbbpvxxa |
1tul_*_93 | 1tul | - | 93 | 101 | IKLNKGQML | EEE-TT-EE | xbbxpvxxa |
1uou_A_430 | 1uou | A | 430 | 437 | .RLRRGTPW | .EE-TT-EE | .xbxxvxwa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bdo_*_108 | 1bdo | * | BTNBIOTIN | I - 117 |
1bdo_*_108 | 1bdo | * | BTNBIOTIN | E - 119 |
1htp_*_49 | 1htp | * | OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID | V - 59 |
1htp_*_49 | 1htp | * | OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID | S - 61 |
1pkh_A_153 | 1pkh | A | EGLETHYLENE GLYCOL | N - 158 |
1pkh_A_153 | 1pkh | A | EGLETHYLENE GLYCOL | Q - 159 |
1pkh_A_153 | 1pkh | A | EGLETHYLENE GLYCOL | R - 160 |
1q5h_A_98 | 1q5h | A | DUDDEOXYURIDINE-5'-DIPHOSPHATE | R - 105 |
1q5h_A_98 | 1q5h | A | DUDDEOXYURIDINE-5'-DIPHOSPHATE | Q - 108 |
1q5h_A_98 | 1q5h | A | MGMAGNESIUM ION | E - 112 |
1q5h_A_98 | 1q5h | A | MGMAGNESIUM ION | R - 113 |
1six_A_103 | 1six | A | MGMAGNESIUM ION | R - 110 |
1six_A_103 | 1six | A | DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE | R - 110 |
1six_A_103 | 1six | A | MGMAGNESIUM ION | Q - 113 |
1six_A_103 | 1six | A | DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE | Q - 113 |
Clusters included in this Subclass |
CLUSTER: AR.3.52 |
CLUSTER: AR.4.47 |
CLUSTER: AR.5.63 |