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Information on SUBCLASS 1.2.2
Subclass Accession number: 1000
Subclass: 1.2.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 53473 (>75 %)  53473 (>75 %)  53474 (>75 %)  53474 (>75 %)  
Number of loops: 29

Average sequence ID (%) : 32.9 +/- 25.0
Average RMSD (Å) : 0.310 +/- 0.135

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: GXXhG
(φψ)-conformation: bbeaa
Pattern: [fgilmptv][AGLT]x[ACDGS]x[agl][acgps]x[filmtv]
Conservation:-0.8821.713-0.8720.494-0.8691.1700.367-1.005-0.115
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8q_*_881a8q   -9199VAHSMGGGEEEETTHHHHbbbeaaaaa
1c4x_A_1041c4x   A107115VGNSMGGAVEEETHHHHHbbbeaaaaa
1cnz_A_51cnz   A1119PGDGIGPEVEESTTHHHHaebeaaaaa
1din_*_1131din   -120128VGYCLGGALEEETHHHHHbbbeaaaaa
1ehy_A_1011ehy   A104112VGHDFAAIVEEETHHHHHbbbeaaaaa
1ei9_A_1091ei9   A112120MGFSQGGQFEEETTHHHHbbbeaaaaa
1fj2_A_1081fj2   A111119GGFSQGGALEEETHHHHHbbbeaaaaa
1fye_A_1151fye   A117125IGWSAGANLEEETHHHHHbbbeaaaaa
1g66_A_831g66   A8795VGYSQGGEIEEETHHHHHbbbeaaaaa
1gkl_A_9481gkl   A951959GGFAMGGLTEEETHHHHHbebeaaaaa
1gpm_A_821gpm   A8391FGVCYGMQTEEETHHHHHbbbeaaaaa
1isp_A_711isp   A7482VAHSMGGANEEETHHHHHbbbeaaaaa
1iup_A_971iup   A100108VGNAFGGGLEEETHHHHHbbxeaaaaa
1jkm_A_1931jkm   A199207QGESGGGNLEEETHHHHHbbbeaaaaa
1jmk_C_741jmk   C7785FGYSAGCSLEEETHHHHHbbbeaaaaa
1ju3_A_1151ju3   A115122.GVSYLGVT.EETHHHHH.ebeaaaaa
1l7a_A_1701l7a   A178186TGGSQGGGLEEETHHHHHbebeaaaaa
1llf_A_1981llf   A206214FGESAGSMSEEETHHHHHbbbeaaaaa
1mna_A_1421mna   A145153LGHSGGALLEEETHHHHHbbbeaaaaa
1mtz_A_991mtz   A102110MGSSYGGALEEETHHHHHbbbeaaaaa
1nx9_A_1951nx9   A202210TGSAYEGFTEEETHHHHHbebeaaaaa
1orv_A_6191orv   A627635WGWSYGGYVEEETHHHHHbbbeaaaaa
1q0r_A_961q0r   A99107VGLSMGATIEEETHHHHHbbbeaaaaa
1qfm_A_5481qfm   A551559NGGSNGGLLEEETHHHHHbbbeaaaaa
1qtr_A_1071qtr   A110118FGGSWGSTLEEETHHHHHxbbeaaaaa
1qvc_A_531qvc   A5866VLFGKLAEVEEETHHHHHbbbeaaaaa
1tca_*_991tca   -102110LTWSQGGLVEEETHHHHHbbbeaaaaa
1uwc_A_1261uwc   A130138TGHSLGASMEEETHHHHHbebeaaaaa
1vj5_A_3271vj5   A330338IGHDWGGMLEEETHHHHHbbbeaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1din_*_1131din   *     CSD3-SULFINOALANINE G - 121
1din_*_1131din   *     CSD3-SULFINOALANINE Y - 122
1din_*_1131din   *     CSD3-SULFINOALANINE C - 123
1din_*_1131din   *     CSD3-SULFINOALANINE L - 124
1din_*_1131din   *     CSD3-SULFINOALANINE G - 125
1din_*_1131din   *     CSD3-SULFINOALANINE G - 126
1din_*_1131din   *     CSD3-SULFINOALANINE A - 127
1din_*_1131din   *     CSD3-SULFINOALANINE L - 128
1ei9_A_1091ei9   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 126
1ei9_A_1091ei9   A     NAGN-ACETYL-D-GLUCOSAMINE R - 127
1g66_A_831g66   A     GOLGLYCEROL S - 90
1g66_A_831g66   A     GOLGLYCEROL Q - 91
1gkl_A_9481gkl   A     GOLGLYCEROL F - 953
1gkl_A_9481gkl   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID A - 954
1gkl_A_9481gkl   A     GOLGLYCEROL A - 954
1gkl_A_9481gkl   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID M - 955
1gkl_A_9481gkl   A     GOLGLYCEROL M - 955
1gkl_A_9481gkl   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID G - 957
1gkl_A_9481gkl   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID L - 958
1gpm_A_821gpm   A     CITCITRIC ACID V - 85
1gpm_A_821gpm   A     CITCITRIC ACID C - 86
1gpm_A_821gpm   A     CITCITRIC ACID Y - 87
1gpm_A_821gpm   A     CITCITRIC ACID G - 88
1gpm_A_821gpm   A     CITCITRIC ACID Q - 90
1isp_A_711isp   A     GOLGLYCEROL H - 76
1isp_A_711isp   A     GOLGLYCEROL S - 77
1isp_A_711isp   A     GOLGLYCEROL M - 78
1iup_A_971iup   A     ISBISOBUTYRIC ACID N - 102
1iup_A_971iup   A     ISBISOBUTYRIC ACID A - 103
1iup_A_971iup   A     ISBISOBUTYRIC ACID F - 104
1iup_A_971iup   A     ISBISOBUTYRIC ACID G - 105
1ju3_A_1151ju3   A     PBCPHENYL BORONIC ACID V - 116
1ju3_A_1151ju3   A     PBCPHENYL BORONIC ACID S - 117
1ju3_A_1151ju3   A     PBCPHENYL BORONIC ACID Y - 118
1ju3_A_1151ju3   A     PBCPHENYL BORONIC ACID L - 119
1llf_A_1981llf   A     F23TRICOSANOIC ACID E - 208
1llf_A_1981llf   A     F23TRICOSANOIC ACID S - 209
1llf_A_1981llf   A     F23TRICOSANOIC ACID A - 210
1llf_A_1981llf   A     F23TRICOSANOIC ACID G - 211
1llf_A_1981llf   A     F23TRICOSANOIC ACID S - 212
1llf_A_1981llf   A     F23TRICOSANOIC ACID M - 213
1nx9_A_1951nx9   A     AIC(2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3, 3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID S - 204
1nx9_A_1951nx9   A     AIC(2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3, 3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID A - 205
1nx9_A_1951nx9   A     AIC(2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3, 3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID E - 207
1orv_A_6191orv   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 634
1orv_A_6191orv   A     NAGN-ACETYL-D-GLUCOSAMINE M - 638
1q0r_A_961q0r   A     1PEPENTAETHYLENE GLYCOL L - 101
1q0r_A_961q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) S - 102
1q0r_A_961q0r   A     1PEPENTAETHYLENE GLYCOL S - 102
1q0r_A_961q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) M - 103
1q0r_A_961q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) T - 106
1qfm_A_5481qfm   A     SGL1-HYDROXY-1-THIO-GLYCEROL G - 553
1qfm_A_5481qfm   A     SGL1-HYDROXY-1-THIO-GLYCEROL S - 554
1qfm_A_5481qfm   A     SGL1-HYDROXY-1-THIO-GLYCEROL N - 555
1qfm_A_5481qfm   A     SGL1-HYDROXY-1-THIO-GLYCEROL G - 556
1uwc_A_1261uwc   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID H - 132
1uwc_A_1261uwc   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID S - 133
1uwc_A_1261uwc   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID L - 134
1uwc_A_1261uwc   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID G - 135
1vj5_A_3271vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA D - 333
1vj5_A_3271vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA W - 334
1vj5_A_3271vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA M - 337
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a8q_*_881a8q   * NULCATALYTIC TRIAD.S - 94
1fj2_A_1081fj2   A ACAACTIVE SITE IN CHAIN AS - 114
1gkl_A_9481gkl   A FEAFER BINDING SITE FOR CHAIN AA - 954
1gkl_A_9481gkl   A FEAFER BINDING SITE FOR CHAIN AL - 958
1qfm_A_5481qfm   A ASACTIVE SITE: CATALYTIC TRIADS - 554

Clusters included in this Subclass
CLUSTER: EH.0.8
CLUSTER: EH.1.18
CLUSTER: EH.2.167
CLUSTER: EH.2.21