Information on SUBCLASS 4.25.1 |
Subclass Accession number: 6312
Subclass: 4.25.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.0 +/- 12.4 Average RMSD (Å) : 0.900 +/- 0.173 Consensus geometry
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Consensus Sequence: | XXXXDpXX |
(φψ)-conformation: | bpaeaabb |
Pattern: | x | x | [LY] | [ATV] | x | [KPR] | x | [GS] | [D] | [DET] | [FKT] | x | [AFV] | [FR] | x | [HTY] | x | [NTV] |
Conservation: | -0.845 | -1.002 | 0.407 | -0.058 | -0.451 | 0.099 | -1.317 | 1.068 | 3.166 | 0.178 | -0.766 | -0.294 | -0.451 | 0.222 | -0.530 | 0.178 | 0.768 | -0.373 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fep_A_172 | 1fep | A | 177 | 194 | FSLTGPLGDEFSFRLYGN | EEEEEE-SSSEEEEEEEE | bbbbexaeaabbbbbbbb |
1k32_A_364 | 1k32 | A | 364 | 381 | IRYVRRGGDTKVAFIHGT | EEEEEE-SSSEEEEEEEE | xabbbpaeaabbbbbbbb |
1pn2_A_239 | 1pn2 | A | 241 | 258 | RVLAWKESDDTIVFQTHV | EEEEEE-SSSEEEEEEEE | bxbbbxaeaabbxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | N - 176 |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | F - 177 |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | S - 178 |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | R - 190 |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | L - 191 |
1fep_A_172 | 1fep | A | MSESELENOMETHIONINE | Y - 192 |
Clusters included in this Subclass |
CLUSTER: HA.3.278 |