Information on SUBCLASS 5.25.1 |
Subclass Accession number: 7963
Subclass: 5.25.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 4.8 +/- 6.6 Average RMSD (Å) : 1.033 +/- 0.351 Consensus geometry
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Consensus Sequence: | pXXXXXpXh |
(φψ)-conformation: | bbpplpabb |
Pattern: | x | [IY] | x | [KST] | x | x | x | x | x | [KQ] | x | [AIV] | x | [GTV] |
Conservation: | 0.019 | 2.027 | -0.697 | 0.377 | -0.697 | -0.816 | -0.577 | -0.220 | 0.019 | 2.159 | -0.577 | 0.615 | -0.935 | -0.697 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h1d_A_189 | 1h1d | A | 193 | 206 | HYSSYLEYMKVVDG | EEEEE-TTSSSEEE | bbxbbppvbaxxbb |
1mu5_A_127 | 1mu5 | A | 128 | 141 | EIETSPVNSKRIYT | EEEEE-TT-SEEEE | bbbbbppvxabbbb |
1oac_A_37 | 1oac | A | 37 | 50 | AYVKVKPGAQTAIV | EEEEE-TT-SEEEE | bbbbbbxvxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1d_A_189 | 1h1d | A | BIABIA BINDING SITE FOR CHAIN A | L - 198 |
Clusters included in this Subclass |
CLUSTER: HA.5.116 |