Information on SUBCLASS 5.25.1 |
Subclass Accession number: 6404
Subclass: 5.25.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.6 +/- 24.6 Average RMSD (Å) : 0.860 +/- 0.472 Consensus geometry
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Consensus Sequence: | hhXppppXh |
(φψ)-conformation: | bpaapaabb |
Pattern: | x | x | [lmv] | [dp] | x | [EFHR] | [DS] | [KTV] | [HST] | x | [FGTV] | [fgvy] | x |
Conservation: | -1.000 | -1.000 | 0.138 | 0.353 | -0.722 | 0.117 | 2.101 | 0.740 | 0.956 | -0.796 | -0.807 | -1.055 | -1.025 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amx_*_174 | 1amx | - | 178 | 190 | GDMLPEDTTHVRW | EE--TT-TTEEEE | bbbxaabaabbxb |
1feh_A_133 | 1feh | A | 133 | 143 | ..VDERSKSLTVD | ..EE--SSSEEEE | ..bbaaxaabbbb |
1jwy_A_569 | 1jwy | A | 569 | 581 | YEEPRFSKTEFGV | EE--SS-SSEEEE | bbxxaapaabbbb |
1miq_A_153 | 1miq | A | 156 | 168 | FYLPVHDVHAGYL | EE--TT-TTEEEE | bbbpaabaabbbb |
1pfz_A_153 | 1pfz | A | 156 | 168 | FYLPVHDKHTGFL | EE--TT-TTEEEE | bbbpaabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1feh_A_133 | 1feh | A | FS4IRON/SULFUR CLUSTER | L - 140 |
1feh_A_133 | 1feh | A | FS4IRON/SULFUR CLUSTER | V - 142 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.6.84 |