Information on SUBCLASS 6.16.1 |
Subclass Accession number: 6450
Subclass: 6.16.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.2 +/- 39.2 Average RMSD (Å) : 0.767 +/- 0.289 Consensus geometry
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Consensus Sequence: | XpphXppphh |
(φψ)-conformation: | bbpaabapbb |
Pattern: | [PT] | [FL] | [TV] | x | [KR] | [ST] | [AP] | [EFY] | [NQ] | [NQ] | [ER] | [AW] | [WY] | [Q] | [AM] | [GY] | [AI] | x |
Conservation: | -0.034 | -0.035 | -0.295 | -0.716 | 0.833 | 0.151 | -0.245 | -0.904 | 0.176 | 0.176 | -0.059 | -0.194 | 2.571 | 2.171 | -0.716 | -0.740 | -0.952 | -1.187 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b63_A_107 | 1b63 | A | 109 | 126 | TLTSRTAEQQEAWQAYAE | EEEEE-TT-SSEEEEEEE | bbbbbxaabaxbbbbbbb |
1ucy_E_198 | 1ucy | E | 198 | 215 | PFVMKSPYNNRWYQMGIV | EEEEE-SSS--EEEEEEE | xbbbxxaaxaxxbxabbx |
2hnt_F_198 | 2hnt | F | 198 | 215 | PFVMKSPFNNRWYQMGIV | EEEEE-SSSS-EEEEEEE | xbbbxxaabaxxbxabbp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b63_A_107 | 1b63 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | L - 110 |
1b63_A_107 | 1b63 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | S - 112 |
Clusters included in this Subclass |
CLUSTER: HA.6.154 |