Information on SUBCLASS 8.7.1 |
Subclass Accession number: 828
Subclass: 8.7.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.2 (>50 %) 3.2.2.223.4 (>75 %) 3.4.21 (>75 %) GO : GO:0004175 (>50 %) GO:0004252 (>50 %) GO:0004872 (>75 %) GO:0005509 (>50 %) GO:0005515 (>75 %) GO:0005529 (>50 %) GO:0008233 (>50 %) GO:0008236 (>50 %) GO:0016798 (>50 %) GO:0016799 (>50 %) GO:0030246 (>50 %) GO:0030597 (>50 %) SCOP : 50352 (>75 %) 50370 (>75 %) 50371 (>75 %) 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) 57585 (>75 %) 57586 (>75 %) 57587 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 61.3 +/- -9.5 Average RMSD (Å) : 0.367 +/- 0.058 Consensus geometry
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Consensus Sequence: | SWGpGCAXXcph |
(φψ)-conformation: | abepeblpplbb |
Pattern: | [RT] | [MWY] | [FTY] | [LV] | [T] | [G] | [I] | [V] | [S] | [W] | [G] | [EQR] | [G] | [C] | [A] | x | [KV] | [DG] | [HK] | [FPY] | [G] | [IV] | [Y] | [T] | [KR] |
Conservation: | -0.842 | -0.652 | -0.968 | -0.660 | 0.342 | 0.749 | -0.065 | -0.065 | -0.065 | 2.782 | 0.749 | -0.742 | 0.749 | 1.969 | -0.065 | -1.420 | -1.109 | -0.633 | -0.633 | -1.149 | 0.749 | -0.263 | 1.155 | 0.342 | -0.253 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fjs_A_206 | 1fjs | A | 206 | 230 | TYFVTGIVSWGEGCARKGKYGIYTK | EEEEEEEEEE-SSSS-TT--EEEEE | bbbxabbpabexebvxxvbbxbbxx |
1gj7_B_206 | 1gj7 | B | 206 | 230 | RMTLTGIVSWGRGCALKDKPGVYTR | EEEEEEEEEE-SSSSBTTB-EEEEE | bxbxabbpabexeblbplbxxbbxx |
1kli_H_206 | 1kli | H | 206 | 230 | TWYLTGIVSWGQGCATVGHFGVYTR | EEEEEEEEEE-STTT-TT--EEEEE | bbbxabbpabexeblxpvbbxbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.11.1 |