Information on SUBCLASS 3.10.5 |
Subclass Accession number: 5533
Subclass: 3.10.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 0.0 +/- 0.0 Average RMSD (Å) : 1.067 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXXXcXX |
(φψ)-conformation: | aapplbb |
Pattern: | [DNR] | x | x | [AIL] | x | [AKQ] | x | x | [DGK] | [ATV] | [IKT] | [NSW] | [EFL] |
Conservation: | 1.712 | -0.876 | 0.418 | 0.936 | -0.876 | 0.936 | -0.876 | -0.358 | 0.159 | 1.195 | -1.135 | 0.159 | -1.394 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c8n_A_169 | 1c8n | A | 169 | 181 | RVQLSQTYKAINF | HHHHHHSTT-EEE | aaaaaaxpvxbbb |
1gpm_A_304 | 1gpm | A | 320 | 332 | DEEALKLEDVKWL | HHHHHHSSSEEEE | aaaaaaxbvxabb |
1qoz_A_23 | 1qoz | A | 27 | 39 | NLVIQAHPGTTSE | HHHHHHSTTEEEE | aaaaaabxvbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | L - 172 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | S - 173 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | Q - 174 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | T - 175 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | Y - 176 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | K - 177 |
1c8n_A_169 | 1c8n | A | CACALCIUM ION | A - 178 |
1gpm_A_304 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | F - 315 |
1gpm_A_304 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | F - 319 |
1gpm_A_304 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | A - 333 |
1qoz_A_23 | 1qoz | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 38 |
Clusters included in this Subclass |
CLUSTER: HE.3.225 |