Information on SUBCLASS 4.16.1 |
Subclass Accession number: 5659
Subclass: 4.16.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 23.4 +/- 21.3 Average RMSD (Å) : 0.843 +/- 0.310 Consensus geometry
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Consensus Sequence: | pXGXcXXh |
(φψ)-conformation: | aaeaappb |
Pattern: | [CFGILW] | x | [adknqr] | [ekr] | [fqry] | [G] | [KPQRS] | [DKNS] | [LTV] | x | [ILY] | [AQT] |
Conservation: | -0.870 | -0.494 | -0.795 | -0.087 | -0.390 | 2.805 | -0.176 | 0.305 | 0.313 | -0.969 | 0.418 | -0.059 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a21_A_141 | 1a21 | A | 141 | 152 | LRAVFGKDLNYT | HHHHHGGG-EEE | aaaaaeaaxbbb |
1d5c_A_102 | 1d5c | A | 109 | 120 | ILNERGKDVIIA | HHHHHTTSSEEE | aaaaaeaabxbb |
1gz3_A_229 | 1gz3 | A | 242 | 253 | ITDRYGRNTLIQ | HHHHH-TT-EEE | aaaaaeaapxbx |
1j93_A_278 | 1j93 | A | 281 | 292 | GRRRLGPNVAIQ | HHHHT-SSSEEE | aaaaaeaaxxbb |
1k4k_A_85 | 1k4k | A | 92 | 103 | WRQEQGPDVPLA | HHHHH-TTS-EE | aaaaaeaabwbb |
1o0s_A_245 | 1o0s | A | 258 | 269 | CTKKYGQKTLIQ | HHHHH-TT-EEE | aaaaaeaapxbb |
1qwg_A_209 | 1qwg | A | 215 | 226 | FILKFGSSVNLA | HHHHH-TT--EE | aaaaaeaaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d5c_A_102 | 1d5c | A | MSESELENOMETHIONINE | I - 118 |
1d5c_A_102 | 1d5c | A | MSESELENOMETHIONINE | I - 119 |
1d5c_A_102 | 1d5c | A | MSESELENOMETHIONINE | A - 120 |
1d5c_A_102 | 1d5c | A | MSESELENOMETHIONINE | L - 121 |
1d5c_A_102 | 1d5c | A | MSESELENOMETHIONINE | V - 122 |
1d5c_A_102 | 1d5c | A | GDPGUANOSINE-5'-DIPHOSPHATE | N - 124 |
1k4k_A_85 | 1k4k | A | XEXENON | T - 85 |
1k4k_A_85 | 1k4k | A | XEXENON | T - 88 |
1k4k_A_85 | 1k4k | A | XEXENON | L - 89 |
1k4k_A_85 | 1k4k | A | XEXENON | F - 104 |
Clusters included in this Subclass |
CLUSTER: HE.3.266 |
CLUSTER: HE.4.275 |
CLUSTER: HE.5.401 |
CLUSTER: HE.5.402 |