Information on SUBCLASS 4.3.1 |
Subclass Accession number: 5604
Subclass: 4.3.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 13.3 +/- 18.7 Average RMSD (Å) : 0.950 +/- 0.321 Consensus geometry
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Consensus Sequence: | hXhpXXhh |
(φψ)-conformation: | aapabpbb |
Pattern: | x | x | [AILMV] | [ailt] | [DHNRT] | x | [ACILV] | x | x | x | [EKPS] | x | [KNPQT] | [giltv] | [ilty] | x | [ACIMVY] |
Conservation: | -0.302 | -0.462 | 1.848 | -0.701 | 0.973 | -1.525 | 1.567 | -0.708 | -0.415 | -0.919 | 0.955 | -1.312 | 1.003 | -0.223 | 0.651 | -0.626 | 0.197 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dhs_*_260 | 1dhs | - | 264 | 280 | RLINTQAIFAKCTGMII | HHHHHHHHT-SSEEEEE | aaaaaaaaaxabbbbbb |
1ef8_A_84 | 1ef8 | A | 86 | 102 | RQITRMIQKFPKPIISM | HHHHHHHHH-SS-EEEE | aaaaaaaaaxabxbbxb |
1ezr_A_173 | 1ezr | A | 173 | 189 | PEAAHIVFNESWNVTMV | HHHHHHHHTSSS-EEEE | aaaaaaaaaxaxxbbxx |
1fc4_A_137 | 1fc4 | A | 137 | 153 | ASIIDGVRLCKAKRYRY | HHHHHHHHTS-SEEEEE | aaaaaaaaaxapxbbbb |
1h05_A_84 | 1h05 | A | 84 | 100 | VALRDACAELSAPLIEV | HHHHHHHHT--S-EEEE | aaaaaaaaaxaxxbbxb |
1hzd_A_151 | 1hzd | A | 162 | 178 | RAVINDIANLPVPTIAA | HHHHHHHHT-SS-EEEE | aaaaaaaaapabpbbxb |
1kic_A_117 | 1kic | A | 119 | 135 | QLLADLVMNSEEKVTIC | HHHHHHHHT-SS-EEEE | aaaaaaaaaxaxxbxbx |
1nzy_A_74 | 1nzy | A | 90 | 106 | HQMIHKIIRVKRPVLAA | HHHHHHHHH-SS-EEEE | aaaaaaaaapabxbbxx |
1o8u_A_87 | 1o8u | A | 98 | 114 | QRLLNNLLSIEVPVIAA | HHHHHHHHH--S-EEEE | aaaaaaaaaxabpbbxb |
2mas_A_173 | 2mas | A | 173 | 189 | PEAAHIVFNESWQVTMV | HHHHHHHHHSSS-EEEE | aaaaaaaaaxaxxbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dhs_*_260 | 1dhs | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 281 |
1fc4_A_137 | 1fc4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 138 |
1fc4_A_137 | 1fc4 | A | MSESELENOMETHIONINE | I - 139 |
1fc4_A_137 | 1fc4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | I - 139 |
1fc4_A_137 | 1fc4 | A | MSESELENOMETHIONINE | Y - 153 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | F - 82 |
1nzy_A_74 | 1nzy | A | BCA4-HYDROXYBENZOYL COENZYME A | F - 82 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | A - 85 |
1nzy_A_74 | 1nzy | A | BCA4-HYDROXYBENZOYL COENZYME A | A - 85 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | A - 86 |
1nzy_A_74 | 1nzy | A | BCA4-HYDROXYBENZOYL COENZYME A | A - 86 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | W - 89 |
1nzy_A_74 | 1nzy | A | BCA4-HYDROXYBENZOYL COENZYME A | W - 89 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | H - 90 |
1nzy_A_74 | 1nzy | A | BCA4-HYDROXYBENZOYL COENZYME A | H - 90 |
1nzy_A_74 | 1nzy | A | CACALCIUM ION | P - 102 |
Clusters included in this Subclass |
CLUSTER: HE.5.57 |