Information on SUBCLASS 5.1.3 |
Subclass Accession number: 8550
Subclass: 5.1.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 30.8 +/- 28.5 Average RMSD (Å) : 0.700 +/- 0.418 Consensus geometry
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Consensus Sequence: | XXGphcpXh |
(φψ)-conformation: | aapbpgpbb |
Pattern: | [AFIV] | [AILTV] | [GT] | [dekt] | [GL] | [EKRS] | [AMV] | [GK] | [EKN] | [AT] | [IVY] | x | [ILV] |
Conservation: | -0.718 | -0.788 | 0.527 | -1.772 | 0.184 | -0.219 | 0.182 | 0.986 | 0.457 | 1.263 | 0.345 | -1.697 | 1.249 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bxk_A_229 | 1bxk | A | 239 | 251 | VATTGKVGETYNI | HHHH--TT-EEEE | aaaaxxpvxbbxb |
1e0t_A_113 | 1e0t | A | 113 | 125 | FTTDLSVGNTVLV | HHHH--TT-EEEE | aaaaxbpgpbbbx |
1kep_A_230 | 1kep | A | 240 | 252 | ILTKGRMGETYLI | HHHH--TT-EEEE | aaaaxxpvxbbxb |
1kew_A_236 | 1kew | A | 246 | 258 | VVTEGKAGETYNI | HHHH--TT-EEEE | aaaaxxpvxbbxb |
1pie_A_182 | 1pie | A | 186 | 198 | AIGFGEVKKAIEL | HHHH-BTTEEEEE | aaaapbplbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bxk_A_229 | 1bxk | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 232 |
1kep_A_230 | 1kep | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 233 |
1kew_A_236 | 1kew | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 239 |
1kew_A_236 | 1kew | A | GOLGLYCEROL | G - 253 |
1kew_A_236 | 1kew | A | GOLGLYCEROL | E - 254 |
1kew_A_236 | 1kew | A | GOLGLYCEROL | T - 255 |
1kew_A_236 | 1kew | A | GOLGLYCEROL | Y - 256 |
1pie_A_182 | 1pie | A | GALD-GALACTOSE | L - 182 |
1pie_A_182 | 1pie | A | GALD-GALACTOSE | D - 183 |
1pie_A_182 | 1pie | A | PO4PHOSPHATE ION | D - 183 |
1pie_A_182 | 1pie | A | GALD-GALACTOSE | Q - 184 |
Clusters included in this Subclass |
CLUSTER: HE.4.166 |