Logo
Information on SUBCLASS 1.4.3
Subclass Accession number: 8871
Subclass: 1.4.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.5 +/- 12.8
Average RMSD (Å) : 0.420 +/- 0.179

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGXX
(φψ)-conformation: aaeaa
Pattern: [AGQ][dery]xx[G][EGPQ][AEGKS]xx[DEHRT]x[flvw]xxx[nsy]
Conservation:0.496-0.362-0.276-0.5233.5630.176-0.015-0.496-0.1190.011-0.322-0.523-0.428-0.629-0.5760.024
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hs6_A_3141hs6   A330345GRLFGEKFRHFNALGGHHHH-HHHHHHHHHHHaaaaeaaaaaaaaaaa
1jqo_A_361jqo   A5065QDLHGPSLREFVQECYHHHH-HHHHHHHHHHHaaaaMaaaaaaaaaaa
1jvs_A_3231jvs   A323338AFEQGQAATTALNAANHHHH-HHHHHHHHHHHaaaaeaaaaaaaaaaa
1nd4_A_2181nd4   A229244AEELGGEWADRFLVLYHHHH-HHHHHHHHHHHaaaaeaaaaaaaaaaa
1qsa_A_5451qsa   A551566AYNAGPGRVRTWLGNSHHHH-HHHHHHHHHHHaaaaeaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hs6_A_3141hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID F - 314
1hs6_A_3141hs6   A     ZNZINC ION N - 317
1hs6_A_3141hs6   A     ZNZINC ION E - 318
1hs6_A_3141hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID E - 318
1hs6_A_3141hs6   A     ZNZINC ION T - 321
1hs6_A_3141hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID T - 321
1hs6_A_3141hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID V - 322
1hs6_A_3141hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID E - 325
1hs6_A_3141hs6   A     IMDIMIDAZOLE L - 343
1hs6_A_3141hs6   A     IMDIMIDAZOLE G - 344
1hs6_A_3141hs6   A     IMDIMIDAZOLE G - 345
1hs6_A_3141hs6   A     IMDIMIDAZOLE W - 346
1hs6_A_3141hs6   A     IMDIMIDAZOLE G - 347
1hs6_A_3141hs6   A     IMDIMIDAZOLE E - 348
1hs6_A_3141hs6   A     IMDIMIDAZOLE Q - 350
1hs6_A_3141hs6   A     IMDIMIDAZOLE N - 351
1jvs_A_3231jvs   A     MSESELENOMETHIONINE A - 323
1jvs_A_3231jvs   A     MSESELENOMETHIONINE F - 324
1jvs_A_3231jvs   A     MSESELENOMETHIONINE E - 325
1jvs_A_3231jvs   A     MSESELENOMETHIONINE A - 329
1jvs_A_3231jvs   A     MSESELENOMETHIONINE A - 330
1jvs_A_3231jvs   A     MSESELENOMETHIONINE A - 333
1jvs_A_3231jvs   A     MSESELENOMETHIONINE L - 334
1jvs_A_3231jvs   A     MSESELENOMETHIONINE N - 335
1jvs_A_3231jvs   A     MSESELENOMETHIONINE N - 338
1jvs_A_3231jvs   A     MSESELENOMETHIONINE F - 345
1nd4_A_2181nd4   A     KANKANAMYCIN A L - 223
1nd4_A_2181nd4   A     KANKANAMYCIN A R - 226
1nd4_A_2181nd4   A     KANKANAMYCIN A D - 227
1nd4_A_2181nd4   A     KANKANAMYCIN A E - 230
1nd4_A_2181nd4   A     KANKANAMYCIN A E - 231
1qsa_A_5451qsa   A     GOLGLYCEROL R - 545
1qsa_A_5451qsa   A     GOLGLYCEROL A - 551
1qsa_A_5451qsa   A     GOLGLYCEROL Y - 552
1qsa_A_5451qsa   A     GOLGLYCEROL N - 553
1qsa_A_5451qsa   A     GOLGLYCEROL G - 555

Clusters included in this Subclass
CLUSTER: HH.1.52