Information on SUBCLASS 3.13.1 |
Subclass Accession number: 4743
Subclass: 3.13.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.2 +/- 13.5 Average RMSD (Å) : 0.760 +/- 0.195 Consensus geometry
|
Consensus Sequence: | pXGhXXp |
(φψ)-conformation: | aalbbaa |
Pattern: | x | x | [EFRY] | [agst] | [G] | x | x | [acst] | [ensy] | x | [GLMY] | [erw] |
Conservation: | 0.306 | -0.391 | -0.143 | -0.155 | 3.078 | -0.268 | -0.509 | -0.084 | -0.509 | -0.627 | -0.306 | -0.392 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1evs_A_98 | 1evs | A | 98 | 109 | LERSGLNIEDLE | HHHHT--HHHHH | aaaavxbaaaaa |
1n1b_A_383 | 1n1b | A | 404 | 415 | LKEHGFFCLQYL | HHHHS---HHHH | aaaavbbaaaaa |
1nvm_A_280 | 1nvm | A | 285 | 296 | LGYAGVYSSFLR | HHHHT--TTHHH | aaaavbpaaaaa |
1qzz_A_126 | 1qzz | A | 129 | 140 | VVRTGRPAYAGR | HHHHS--SHHHH | aaaavxxaaaaa |
1r88_A_177 | 1r88 | A | 188 | 199 | QQFGGVDTNGMW | HHHH---THHHH | aaaavbbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1n1b_A_383 | 1n1b | A | HGMERCURY (II) ION | L - 387 |
1n1b_A_383 | 1n1b | A | HGMERCURY (II) ION | C - 388 |
1n1b_A_383 | 1n1b | A | HGMERCURY (II) ION | Y - 389 |
1n1b_A_383 | 1n1b | A | HGMERCURY (II) ION | V - 392 |
1n1b_A_383 | 1n1b | A | MGMAGNESIUM ION | Y - 426 |
1n1b_A_383 | 1n1b | A | MGMAGNESIUM ION | E - 429 |
1nvm_A_280 | 1nvm | A | SULSULFATE ANION | G - 284 |
1nvm_A_280 | 1nvm | A | SULSULFATE ANION | Y - 287 |
1nvm_A_280 | 1nvm | A | MNMANGANESE (II) ION | Y - 291 |
1nvm_A_280 | 1nvm | A | OXLOXALATE ION | Y - 291 |
Clusters included in this Subclass |
CLUSTER: HH.3.249 |
CLUSTER: HH.4.152 |