ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.41.1

Subclass Accession number: 9090
Subclass: 4.41.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 6.1 +/- 0.0
Average RMSD (Å) : 1.400 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XXcppppp
(φψ)-conformation:	aalppbaa

Pattern:	x	[GK]	[FL]	[KR]	[DG]	[MV]	[AY]	[AD]	[Y]	[AF]	[KR]	x	[AV]	x	x	x	[DG]	[EK]	[HR]	[ES]	[EN]	[RS]	[AL]	x	[AK]	[FL]	[MT]	[QR]	[DE]	[A]	[IL]	[AE]	[KL]
Conservation:	-0.741	-0.528	0.110	0.960	0.110	0.322	-0.528	-0.741	3.936	-0.741	0.960	-0.316	-0.316	-1.591	-0.953	-0.953	0.110	0.535	0.747	-0.103	0.322	-0.528	-0.741	-0.741	-0.528	0.110	-0.316	0.535	1.172	1.385	0.535	-0.528	-0.953

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1gnl_A_137	1gnl	A	148	180	FGLKGMAAYAKHADVLGKHENSLDAFMQEALAK	HHHHHHHHHHHHHHHTT---HHHHHHHHHHHHH	aaaaaaaaaaaaaaaavbbbaaaaaaaaaaaaa
1ld8_A_94	1ld8	A	94	126	DKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL	HHHHHHHHHHHHHHHHT---HHHHHHHHHHHHH	aaaaaaaaaaaaaaaalxxbaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gnl_A_137	1gnl	A	FSOIRON/SULFUR/OXYGEN HYBRID CLUSTER	Y - 156

Clusters included in this Subclass