Information on SUBCLASS 5.3.2 |
Subclass Accession number: 2441
Subclass: 5.3.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7.4 (>75 %) GO : GO:0016301 (>75 %) GO:0016776 (>75 %) GO:0019205 (>75 %) SCOP : 52539 (>50 %) 52540 (>50 %) 52541 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 12.5 +/- 14.7 Average RMSD (Å) : 0.960 +/- 0.336 Consensus geometry
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Consensus Sequence: | ppcXXhXpX |
(φψ)-conformation: | aalppppaa |
Pattern: | [AIKL] | [AKL] | [qrt] | [AMY] | [IMVW] | [dek] | [DNQR] | [gl] | [adpv] | x | [ILTV] | [NPS] | [DPQS] | x | [FGLV] | [imt] |
Conservation: | -0.714 | -0.304 | -0.300 | 0.082 | 0.761 | 0.068 | 1.264 | 0.359 | -1.110 | -1.874 | 1.393 | 1.810 | 0.589 | -0.579 | -1.114 | -0.331 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cc1_L_334 | 1cc1 | L | 335 | 350 | LARMWVQNPELSPVGQ | HHHHHHH--B--HHHH | aaaaaaalwxxxaaaa |
1nm8_A_496 | 1nm8 | A | 503 | 518 | KLQAIEDLVSTPDIFM | HHHHHHTT----HHHH | aaaaaaavbxpwaaaa |
1qf9_A_52 | 1qf9 | A | 55 | 70 | IATMIKNGEIVPSIVT | HHHHHHTT----HHHH | aaaaaaavxxxpaaaa |
1qmg_A_540 | 1qmg | A | 540 | 555 | ALVAVDNGAPINQDLI | HHHHHHTT----HHHH | aaaaaaavpxxxaaaa |
1zin_*_44 | 1zin | - | 49 | 64 | AKQYMDRGDLVPDEVT | HHHHHHHT----HHHH | aaaaaaavxxxwaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.135 |
CLUSTER: HH.6.47 |