Information on SUBCLASS 6.2.1 |
Subclass Accession number: 4940
Subclass: 6.2.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 21.7 +/- 19.1 Average RMSD (Å) : 0.623 +/- 0.262 Consensus geometry
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Consensus Sequence: | pXhphGhpXX |
(φψ)-conformation: | aapbpgppaa |
Pattern: | [aeknt] | [akrt] | [agkmv] | [filmv] | [AEKNRS] | x | [acilvy] | [GKRT] | [adep] | [GQ] | [AIKMTV] | [enprst] | x | x | [DEHQ] | [ILV] | [acdgst] | [aegknrs] | x | [AILV] |
Conservation: | -0.807 | -0.500 | -0.200 | 0.342 | 0.117 | -0.808 | -0.210 | 0.435 | 0.688 | 2.629 | 0.123 | -0.827 | -0.964 | -1.080 | 1.539 | 1.395 | -0.781 | -0.831 | -0.908 | 0.649 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1az9_*_178 | 1az9 | - | 196 | 215 | TRAMEKCRPGMFEYHLEGEI | HHHHHH--TTSBHHHHHHHH | aaaaaapbpgxxaaaaaaaa |
1az9_*_284 | 1az9 | - | 298 | 317 | ETSLRLYRPGTSILEVTGEV | HHHHHH-STT--HHHHHHHH | aaaaaapbxgxbaaaaaaaa |
1b6a_*_163 | 1b6a | - | 181 | 200 | KYVMSWIKPGMTMIEICEKL | HHHHHH--TTSBHHHHHHHH | aaaaaaxbxgxxaaaaaaaa |
1c22_A_120 | 1c22 | A | 134 | 153 | YLALRMVKPGINLREIGAAI | HHHHHH--TT-BHHHHHHHH | aaaaaaxbxvxxaaaaaaaa |
1chm_A_161 | 1chm | A | 179 | 198 | AAVVEALGDQVPEYEVALHA | HHHHHH--TT-BHHHHHHHH | aaaaaaxbxvxxaaaaaaaa |
1chm_A_272 | 1chm | A | 286 | 305 | EAGLKLIKPGARCSDIAREL | HHHHHH--TT-BHHHHHHHH | aaaaaaxbxgpxaaaaaaaa |
1jtg_B_85 | 1jtg | B | 85 | 104 | LAKFNQVTVGMTRAQVLATV | HHHHHH--TT-BHHHHHHHH | aaaaaaxbpgxxaaaaaaaa |
1o0x_A_123 | 1o0x | A | 137 | 156 | EKAIKMIKPGIRLGDVSHCI | HHHHHT--TTSBHHHHHHHH | aaaaaaxbpgxbaaaaaaaa |
1pv9_A_127 | 1pv9 | A | 145 | 164 | MAAIEEITEGKREREVAAKV | HHHHHH--TT-BHHHHHHHH | aaaaaaxbxvxxaaaaaaaa |
1pv9_A_232 | 1pv9 | A | 246 | 265 | KRAVEAAKPGMTAKELDSIA | HHHHHH--TT-BHHHHHHHH | aaaaaapbxgxxaaaaaaaa |
1qxy_A_6 | 1qxy | A | 24 | 43 | NTMQAATKPGITTKELDNIA | HHHHHH--TT-BHHHHHHHH | aaaaaaxbpvxxaaaaaaaa |
1xgs_A_106 | 1xgs | A | 116 | 135 | NAAISVARAGVEIKELGKAI | HHHHHH-STT-BTHHHHHHH | aaaaaaxbxgxxaaaaaaaa |
1xgs_A_3 | 1xgs | A | 18 | 37 | EKAIKLARPGMLLLELAESI | HHHHHH--TT-BHHHHHHHH | aaaaaaxbpvxxaaaaaaaa |
Clusters included in this Subclass |
CLUSTER: HH.5.66 |
CLUSTER: HH.6.28 |