Information on SUBCLASS 6.39.1 |
Subclass Accession number: 4982
Subclass: 6.39.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0000287 (>50 %) GO:0005489 (>50 %) GO:0016168 (>50 %) GO:0042314 (>50 %) GO:0045156 (>50 %) GO:0046906 (>50 %) SCOP : 81482 (>75 %) 81483 (>75 %) 81484 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 65.2 +/- -15.6 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | phhphXYNPh |
(φψ)-conformation: | aaebaaapaa |
Pattern: | [ST] | [H] | [L] | [D] | [W] | [V] | [NS] | [N] | [FTV] | [G] | [Y] | [QT] | [FY] | [GL] | [HN] | [FW] | [FH] | [Y] | [N] | [P] | [AG] | [H] | [M] | x | [AS] | [IV] | [S] | [F] | [FL] | [F] | [TV] | [N] | [AC] | [LM] | [A] | [L] | [AGS] | [LM] | [H] | [G] | [AGS] | [L] | [IV] | [L] | [S] | [AV] |
Conservation: | -0.738 | 1.668 | -0.153 | 0.758 | 3.034 | -0.153 | -0.651 | 0.758 | -1.519 | 0.758 | 1.213 | -1.028 | 0.250 | -1.767 | -0.191 | 0.071 | -0.521 | 1.213 | 0.758 | 1.213 | -0.875 | 1.668 | 0.302 | -1.569 | -0.825 | -0.377 | -0.153 | 0.758 | -0.759 | 0.758 | -0.904 | 0.758 | -0.644 | -0.514 | -0.153 | -0.153 | -1.165 | -0.517 | 1.668 | 0.758 | -1.165 | -0.153 | -0.375 | -0.153 | -0.153 | -1.040 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dxr_L_152 | 1dxr | L | 152 | 197 | SHLDWVNNFGYQYLNWFYNPGHMSSVSFLFVNAMALGLHGGLILSV | HHHHHHHHHHHTTS-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaGbaaaxaaaaaaaaaaaaaaaaaaaaaaaaaaa |
1eys_L_160 | 1eys | L | 160 | 205 | SHLDWVSNVGYQFLHFHYNPAHMLAISFFFTNCLALSMHGSLILSV | HHHHHHHHHHGGGS-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaagbaaaxaaaaaaaaaaaaaaaaaaaaaaaaaaa |
1rzh_L_152 | 1rzh | L | 152 | 197 | THLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLSA | HHHHHHHHHHHTTS-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaexaaaxaaaaaaaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.8.108 |