Information on SUBCLASS 2.3.9 |
Subclass Accession number: 141
Subclass: 2.3.9 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 9.2 +/- 10.4 Average RMSD (Å) : 0.840 +/- 0.134 Consensus geometry
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Consensus Sequence: | pchXXh |
(φψ)-conformation: | aapabb |
Pattern: | [adqr] | [EGQS] | x | [FIL] | [DQS] | [DGT] | [ACKLV] | x | x | [AGLV] | [altv] | [AFIV] |
Conservation: | -1.445 | 0.510 | -0.554 | 1.830 | 1.391 | 0.648 | -0.957 | -0.059 | -0.774 | -0.488 | -0.713 | 0.613 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ew0_A_139 | 1ew0 | A | 140 | 151 | RSILDTVPDATV | HHHHTT-SSEEE | aaaaaaxaxxbb |
1m2x_A_239 | 1m2x | A | 250 | 261 | QQKFSGAQYVVA | HHHTTT-SEEEE | aaaaaapabbbx |
1moq_*_453 | 1moq | - | 458 | 469 | AEDFSDKHHALF | HHHHTT-SEEEE | aaaaaaxabbbb |
1nwz_A_20 | 1nwz | A | 20 | 31 | DGQLDGLAFGAI | HHHHTT-SSEEE | aaaaaaxabxbb |
1p90_A_155 | 1p90 | A | 160 | 171 | VEQIQDCQVLYV | HHHTTT-SEEEE | aaaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ew0_A_139 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 151 |
1ew0_A_139 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 152 |
1ew0_A_139 | 1ew0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 153 |
1m2x_A_239 | 1m2x | A | GOLGLYCEROL | V - 239 |
1nwz_A_20 | 1nwz | A | HC44'-HYDROXYCINNAMIC ACID | I - 31 |
Clusters included in this Subclass |
CLUSTER: HE.4.85 |