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Information on SUBCLASS 5.55.1
Subclass Accession number: 1450
Subclass: 5.55.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  2.1 (>50 %)  2.1.1 (>50 %)  
GO : GO:0003676 (>50 %)  GO:0003677 (>50 %)  GO:0005351 (>50 %)  GO:0005386 (>50 %)  GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0009008 (>50 %)  GO:0015144 (>50 %)  GO:0015290 (>50 %)  GO:0015291 (>50 %)  GO:0016741 (>75 %)  GO:0016757 (>75 %)  GO:0016763 (>75 %)  GO:0051119 (>50 %)  
SCOP : 53162 (>75 %)  53167 (>75 %)  53168 (>75 %)  53334 (>75 %)  53335 (>75 %)  53821 (>50 %)  53822 (>50 %)  53823 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 17.6 +/- 16.9
Average RMSD (Å) : 0.700 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXhpXGphp
(φψ)-conformation: bpppplpaa
Pattern: [AV][ILT][ILV][EGK][GL][EKR][APS][G][HNS][AP][DST][AGV][AE][AK][AR][ERT][ANT]
Conservation:0.193-0.4590.596-0.747-0.7600.308-0.4593.4730.2120.107-0.268-0.9390.093-0.1400.093-0.651-0.651
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gca_*_1411gca   -144160VLLKGEPGHPDAEARTTEEEE-STT-HHHHHHHHbbbxxxpvxaaaaaaaa
1gud_A_1341gud   A137153AIIEGKAGNASGEARRNEEEE-STT-HHHHHHHHbbbxxxpvxaaaaaaaa
1np3_A_421np3   A4258VTVGLRSGSATVAKAEAEEEE--TT-HHHHHHHHbbxxbxplbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gca_*_1411gca   *     CACALCIUM ION I - 141
1gca_*_1411gca   *     CACALCIUM ION Q - 142
1gca_*_1411gca   *     GALD-GALACTOSE E - 149
1gca_*_1411gca   *     CACALCIUM ION E - 149
1gca_*_1411gca   *     GALD-GALACTOSE H - 152
1gca_*_1411gca   *     CACALCIUM ION H - 152
1gca_*_1411gca   *     GALD-GALACTOSE D - 154
1gca_*_1411gca   *     CACALCIUM ION D - 154
1gca_*_1411gca   *     GALD-GALACTOSE A - 155
1gca_*_1411gca   *     CACALCIUM ION A - 155
1gca_*_1411gca   *     GALD-GALACTOSE R - 158
1gca_*_1411gca   *     CACALCIUM ION R - 158
1gud_A_1341gud   A     ZNZINC ION E - 157
1gud_A_1341gud   A     ZNZINC ION K - 160
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gud_A_1341gud   A ZN2ZN BINDING SITE FOR CHAIN AE - 157

Clusters included in this Subclass
CLUSTER: EH.4.263