Information on SUBCLASS 12.1.1 |
Subclass Accession number: 2014
Subclass: 12.1.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.1 (>75 %) 2.1.1 (>75 %) 2.1.1.773.4.23 (>75 %) GO : GO:0004190 (>75 %) GO:0008168 (>75 %) GO:0008171 (>75 %) GO:0008276 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) SCOP : 50629 (>75 %) 50630 (>75 %) 50646 (>75 %) 53334 (>75 %) 53335 (>75 %) 53354 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 50.7 +/- 4.3 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | hhGDGpXGhhXXXPYD |
(φψ)-conformation: | bbepaaaebaaapwba |
Pattern: | [V] | x | [FLV] | [IV] | [CLV] | [G] | [D] | [G] | [RSY] | [KMY] | [G] | [FVY] | [AP] | [EP] | [EFK] | [AS] | [P] | [Y] | [D] | [AV] | [I] | [FHI] | [V] |
Conservation: | 0.264 | -1.299 | -0.845 | 0.046 | -0.795 | 1.172 | 1.172 | 1.172 | -1.249 | -1.098 | 1.172 | -0.593 | -0.336 | -0.444 | -1.249 | -0.386 | 1.626 | 1.626 | 1.172 | -0.608 | 0.264 | -1.047 | 0.264 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dl5_A_128 | 1dl5 | A | 128 | 150 | VIFVCGDGYYGVPEFSPYDVIFV | EEEEES-GGG--GGG--EEEEEE | bbxbxexaaaebaaaxwbabbbb |
1i1n_A_135 | 1i1n | A | 135 | 157 | VQLVVGDGRMGYAEEAPYDAIHV | EEEEES-GGG--GGG--EEEEEE | bbbbbexaaaebaaaxwbabbbb |
1jg1_A_142 | 1jg1 | A | 142 | 164 | VHVILGDGSKGFPPKAPYDVIIV | EEEEES-GGG--GGG--EEEEEE | xbxbxexaaaebaaaxwbabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dl5_A_128 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 133 |
1dl5_A_128 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 134 |
1dl5_A_128 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 135 |
1dl5_A_128 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Y - 136 |
1i1n_A_135 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 140 |
1i1n_A_135 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 141 |
1i1n_A_135 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 142 |
1i1n_A_135 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | R - 143 |
1i1n_A_135 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | H - 156 |
1jg1_A_142 | 1jg1 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 147 |
1jg1_A_142 | 1jg1 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 148 |
1jg1_A_142 | 1jg1 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 149 |
1jg1_A_142 | 1jg1 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | S - 150 |
Clusters included in this Subclass |
CLUSTER: AR.11.12 |