Logo
Information on SUBCLASS 16.2.1
Subclass Accession number: 2022
Subclass: 16.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>50 %)  3.4 (>75 %)  3.4.21 (>50 %)  3.4.21.43.4.24 (>75 %)  3.4.24 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004175 (>75 %)  GO:0004222 (>75 %)  GO:0004222 (>75 %)  GO:0004252 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0008237 (>75 %)  GO:0008237 (>75 %)  GO:0008270 (>75 %)  GO:0008270 (>75 %)  
SCOP : 50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  55485 (>75 %)  55485 (>75 %)  55486 (>75 %)  55486 (>75 %)  55528 (>75 %)  55528 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 72.5 +/- -29.4
Average RMSD (Å) : 0.300 +/- 0.100

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: ChGhXpGGXDXCQGDSGGPh
(φψ)-conformation: bbebaaegbbpbpgapgppb
Pattern: [M][FI][C][AV][G][FVY]x[ES][G][G][IK][D][AS][C][Q][G][D][S][G][G][P][FIV][V]
Conservation:0.166-0.8141.837-1.0760.584-1.041-1.784-0.9370.5840.584-1.5630.584-0.8701.8370.1660.5840.584-0.2520.5840.5841.001-1.087-0.252
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gdn_A_1801gdn   A180202MFCAGVSSGGKDSCQGDSGGPIVEEEE--TT---B--TT-TT-EEEbbbbebaaegbbxbxvapgxxbG
1p57_B_1801p57   B180202MFCAGYPEGGIDACQGDSGGPFVEEEES-TT-S-B--TT-TT-EEEbbbbebaaegbbxbpgapgxxbb
1s83_A_1801s83   A180202MICVGFLEGGKDSCQGDSGGPVVEEEES-TTSS-B--TT-TT-EEEbbbbebaaevbbxbpvapvxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gdn_A_1801gdn   A     GOLGLYCEROL M - 180
1gdn_A_1801gdn   A     GOLGLYCEROL F - 181
1gdn_A_1801gdn   A     GOLGLYCEROL C - 182
1p57_B_1801p57   B     CR42-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL} BENZENOLATE A - 183

Clusters included in this Subclass
CLUSTER: AR.15.1