Information on SUBCLASS 1.3.16 |
Subclass Accession number: 2136
Subclass: 1.3.16 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0046914 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 9.5 +/- 12.2 Average RMSD (Å) : 0.733 +/- 0.289 Consensus geometry
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Consensus Sequence: | pXchX |
(φψ)-conformation: | aalaa |
Pattern: | x | x | x | x | [SY] | x | [DG] | [CIY] | x | [AKR] | [HKP] | [GKL] | x | [DKR] |
Conservation: | -0.197 | -0.275 | -0.275 | -1.171 | 1.672 | -1.428 | 1.972 | 0.238 | -0.060 | 0.494 | 0.238 | -1.428 | -0.275 | 0.494 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ee4_A_418 | 1ee4 | A | 422 | 435 | RYLVSQGCIKPLCD | HHHHHTT-HHHHHH | aaaaaavaaaaaaa |
1gqe_A_6 | 1gqe | A | 20 | 33 | VLRGYLDYDAKKER | HHHHHTTHHHHHHH | aaaaaalaaaaaaa |
1on3_A_378 | 1on3 | A | 378 | 391 | VQQEYGGIIRHGAK | HHHHHTTHHHHHHH | aaaaaavaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | L - 14 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | S - 18 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | R - 22 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | Y - 24 |
1on3_A_378 | 1on3 | A | CDCADMIUM ION | G - 383 |
1on3_A_378 | 1on3 | A | CDCADMIUM ION | R - 387 |
1on3_A_378 | 1on3 | A | CDCADMIUM ION | H - 388 |
1on3_A_378 | 1on3 | A | CDCADMIUM ION | K - 391 |
Clusters included in this Subclass |
CLUSTER: HH.3.273 |