Information on SUBCLASS 4.7.1 |
Subclass Accession number: 290
Subclass: 4.7.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 18.5 +/- 17.4 Average RMSD (Å) : 0.840 +/- 0.288 Consensus geometry
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Consensus Sequence: | XXhPpXhX |
(φψ)-conformation: | aabaaabb |
Pattern: | x | [CFLVY] | [agklv] | x | x | x | [PT] | [DEGKQ] | x | [flvy] | x | x |
Conservation: | -0.287 | 0.157 | -0.594 | -0.435 | -0.434 | -0.205 | 2.859 | 0.745 | -0.564 | 0.194 | -0.744 | -0.693 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aui_A_126 | 1aui | A | 135 | 146 | ALKILYPKTLFL | HHHHHSTTTEEE | aaaaabaaabbb |
1c4x_A_111 | 1c4x | A | 118 | 129 | QLVVEAPERFDK | HHHHH-GGGEEE | aaaaabaaabax |
1cjw_A_67 | 1cjw | A | 72 | 83 | HFLTLCPELSLG | HHHHH-GGGEEE | aaaaabaaabbb |
1cvl_*_89 | 1cvl | - | 95 | 106 | YVAAVAPQLVAS | HHHHH-GGGEEE | aaaaabaaabab |
1fxr_A_16 | 1fxr | A | 16 | 27 | SCVEIAPGAFAM | HHHHH-TTTEEE | aaaaabaaabbx |
1iqz_A_16 | 1iqz | A | 16 | 27 | ACGAAAPDIYDY | HHHHH-TTTEEE | aaaaabaaabbb |
1jk7_A_100 | 1jk7 | A | 109 | 120 | AYKIKYPENFFL | HHHHHSTTTEEE | aaaaabaaabbb |
1kic_A_13 | 1kic | A | 20 | 31 | VLLASNTEKVRL | HHHHH-TTTEEE | aaaaaxaaabbx |
1qtr_A_114 | 1qtr | A | 121 | 132 | AYAQTHPERVSE | HHHTT-TTSEEE | aaaaabaaabab |
1vjw_*_15 | 1vjw | - | 15 | 26 | VCENLCPDVFQL | HHHHH-TTTEEE | aaaaabaaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fxr_A_16 | 1fxr | A | FS4IRON/SULFUR CLUSTER | S - 16 |
1fxr_A_16 | 1fxr | A | FS4IRON/SULFUR CLUSTER | C - 17 |
1fxr_A_16 | 1fxr | A | FS4IRON/SULFUR CLUSTER | V - 18 |
1fxr_A_16 | 1fxr | A | FS4IRON/SULFUR CLUSTER | F - 25 |
1fxr_A_16 | 1fxr | A | FS4IRON/SULFUR CLUSTER | M - 27 |
1iqz_A_16 | 1iqz | A | FS4IRON/SULFUR CLUSTER | A - 16 |
1iqz_A_16 | 1iqz | A | FS4IRON/SULFUR CLUSTER | G - 18 |
1iqz_A_16 | 1iqz | A | SULSULFATE ANION | A - 20 |
1iqz_A_16 | 1iqz | A | FS4IRON/SULFUR CLUSTER | Y - 25 |
1iqz_A_16 | 1iqz | A | FS4IRON/SULFUR CLUSTER | Y - 27 |
1kic_A_13 | 1kic | A | NOSINOSINE | L - 13 |
1kic_A_13 | 1kic | A | CACALCIUM ION | D - 14 |
1kic_A_13 | 1kic | A | NOSINOSINE | D - 14 |
1kic_A_13 | 1kic | A | CACALCIUM ION | D - 15 |
1kic_A_13 | 1kic | A | NOSINOSINE | D - 15 |
1vjw_*_15 | 1vjw | * | FS4IRON/SULFUR CLUSTER | V - 15 |
1vjw_*_15 | 1vjw | * | FS4IRON/SULFUR CLUSTER | C - 16 |
1vjw_*_15 | 1vjw | * | FS4IRON/SULFUR CLUSTER | E - 17 |
1vjw_*_15 | 1vjw | * | FS4IRON/SULFUR CLUSTER | F - 24 |
1vjw_*_15 | 1vjw | * | FS4IRON/SULFUR CLUSTER | L - 26 |
Clusters included in this Subclass |
CLUSTER: HE.3.54 |
CLUSTER: HE.5.30 |