|
|
|
|
|
|
|
| Information on SUBCLASS 5.53.1 |
|
Subclass Accession number: 4057
Subclass: 5.53.1 
Type: AR beta-beta link DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 6.7 +/- 13.1 Average RMSD (Å) : 1.300 +/- 0.529 Consensus geometry
|
| Consensus Sequence: | XXhpXXpXX |
| (φψ)-conformation: | bbpbaapbb |
| Pattern: | [CKL] | x | x | [FGV] | [NT] | x | x | [NS] | x | [CRY] |
| Conservation: | -0.379 | -0.379 | -0.902 | -0.798 | 1.951 | 0.040 | -0.483 | 1.707 | -0.483 | -0.274 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1db3_A_215 | 1db3 | A | 215 | 224 | LYLGNMDSLR | EEES-TT-EE | bbbxxaapxb |
| 1ly2_A_61 | 1ly2 | A | 62 | 71 | CEYFNKYSSC | EEE--TT-EE | bbppbaaxbb |
| 1np1_A_95 | 1np1 | A | 96 | 105 | KVDVTSGNYY | EE---TT-EE | abxxbaabbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1np1_A_95 | 1np1 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 97 |
| 1np1_A_95 | 1np1 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | N - 103 |
| 1np1_A_95 | 1np1 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 105 |
| 1np1_A_95 | 1np1 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 107 |
| 1np1_A_95 | 1np1 | A | PO4PHOSPHATE ION | Y - 111 |
| Clusters included in this Subclass |
| CLUSTER: AR.5.254 |
| For any comment or web-related incidence, send an email to the webmaster. |
|