ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 23.1.1

Subclass Accession number: 4336
Subclass: 23.1.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0004175 (>75 %) GO:0004190 (>75 %) GO:0008233 (>75 %)
SCOP : 50629 (>75 %) 50630 (>75 %) 50646 (>75 %)

Number of loops: 3

Average sequence ID (%) : 78.4 +/- -40.4
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	VPSXKCppXGCXXKpLYDSSKSppYEK
(φψ)-conformation:	bppaapapaaaaabpbpbaaabaapbp

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	-0.310	2.962	-0.310	1.093	-0.310	-1.595	0.158	2.028	-0.894	-0.894	-1.011	0.625	2.028	-1.712	-1.361	0.158	-0.310	-0.310	1.093	0.625	-0.310	-0.310	0.158	-0.310	-0.543	-0.894	1.093	0.158	0.158	0.625	0.625	0.158	0.158	-0.310	-0.426	-0.894	-0.894

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1lf2_A_40	1lf2	A	40	76	LWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMN	EEEEBTT--SSGGGGS--B-GGG-TT-EEEEEEEEEE	bbbxxaabaxaaaaaxxbxbaaabaaxbxagpxbbbx
1miq_A_40	1miq	A	40	76	LWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDIT	EEEEBTT--SSGGGGS--B-GGG-TT-EEEEEEEEEE	bbbxxaaxaxaaaaabxxxbaaabaapbxagpxbbbb
1qs8_A_40	1qs8	A	40	76	LWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDIT	EEEEBTT---GGGGGS--B-GGG-TT-EEEEEEEEEE	bbbxxaaxaxaaaaabxbbbaaabaaxbxagpxbbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1lf2_A_40	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	M - 75
1lf2_A_40	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	N - 76
1qs8_A_40	1qs8	A	ACTACETATE ION	K - 46
1qs8_A_40	1qs8	A	ACTACETATE ION	S - 60
1qs8_A_40	1qs8	A	ACTACETATE ION	Y - 66
1qs8_A_40	1qs8	A	ACTACETATE ION	K - 68
1qs8_A_40	1qs8	A	STASTATINE	I - 75
1qs8_A_40	1qs8	A	STASTATINE	T - 76
1qs8_A_40	1qs8	A	STASTATINE	Y - 77

Clusters included in this Subclass