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Information on SUBCLASS 1.3.12
Subclass Accession number: 4473
Subclass: 1.3.12 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.6 +/- 22.8
Average RMSD (Å) : 0.820 +/- 0.084

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: cLcpp
(φψ)-conformation: aalaa
Pattern: xx[AIT]x[EMQ]xxx[DEKN][l]x[dek][ADQT][ADES][EKQ][ILW]x
Conservation:-1.294-1.1550.316-1.1631.242-0.193-1.041-0.2431.1000.2180.679-0.777-0.4770.6132.1980.714-0.738
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1icr_A_1111icr   A123139FFADMHRKDLHDDAEWMHHHHHHHHTT--HHHHHaaaaaaaaaalaaaaaa
1jqn_A_7341jqn   A735751GTALQKVVEDGKQSELEHHHHHHHHTTT-HHHHHaaaaaaaaaavaaaaaa
1kqb_A_1111kqb   A123139YFADMHRVDLKDDDQWMHHHHHHHTTT--HHHHHaaaaaaaaaalaaaaaa
1pn0_A_581pn0   A5874CRTLESLKNLGLADKILHHHHHHHHTTT-HHHHHaaaaaaaaaavaaaaaa
1q1s_C_4341q1s   C445461SNIFQAAEKLGETEKLSHHHHHHHHTTT-HHHHHaaaaaaaaaalaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE R - 121
1icr_A_1111icr   A     NIONICOTINIC ACID F - 124
1icr_A_1111icr   A     NIONICOTINIC ACID W - 138
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE Q - 142
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE Y - 144
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE L - 145
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE V - 147
1icr_A_1111icr   A     FMNFLAVIN MONONUCLEOTIDE L - 151
1kqb_A_1111kqb   A     BEZBENZOIC ACID F - 124
1kqb_A_1111kqb   A     BEZBENZOIC ACID W - 138

Clusters included in this Subclass
CLUSTER: HH.5.124