ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.19.1

Subclass Accession number: 4910
Subclass: 5.19.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 36.7 +/- 38.4
Average RMSD (Å) : 0.967 +/- 0.379

Consensus geometry

d (Å): 13

delta (°): 0-45

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	pXhXhpphX
(φψ)-conformation:	aappaapaa

Pattern:	[EK]	[AR]	[DQ]	[DV]	[EF]	[ER]	[KL]	[L]	[QT]	[AN]	[PY]	x	[IV]	[DT]	[DQ]	[LP]	x	x	x	[R]	[DK]	[AK]	[AI]	x	[EL]	[EL]	[IV]	x	[VY]	[AM]
Conservation:	0.996	-0.193	0.764	-0.904	-0.672	0.517	-0.672	1.953	0.038	-0.425	0.039	-0.920	1.474	0.270	0.764	-0.704	-0.904	-0.688	-0.672	2.911	0.270	-0.210	-0.441	-1.134	-1.151	-1.167	1.474	-0.672	0.253	-0.193

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a0p_*_115	1a0p	-	115	144	EAQVERLLQAPLIDQPLELRDKAMLEVLYA	HHHHHHHHH-S-TTSHHHHHHHHHHHHHHH	aaaaaaaaaaxxaaxaaaaaaaaaaaaaaa
1fyh_A_286	1fyh	A	288	317	KRDDFEKLTNYSVTDLNVQRKAIHELIQVM	HHHHHHHHHT--TTSHHHHHHHHHHHHHHH	aaaaaaaaaabbaapaaaaaaaaaaaaaaa
1fyh_A_86	1fyh	A	88	117	KRDDFEKLTNYSVTDLNVQRKAIDELIQVM	HHHHHHHHHT--TT-HHHHHHHHHHHHHHH	aaaaaaaaaaxxaaxaaaaaaaaaaaaaaa

Clusters included in this Subclass