Information on SUBCLASS 5.29.1 |
Subclass Accession number: 5807
Subclass: 5.29.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.4 +/- 21.2 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | pppXpDhXh |
(φψ)-conformation: | aappaalbb |
Pattern: | [LM] | [AG] | [MQ] | [L] | [LY] | [EQ] | [EKN] | [EH] | [HKQ] | x | [EQ] | [D] | [FG] | [FR] | [LV] | [RY] |
Conservation: | 0.433 | -0.068 | -0.197 | 0.934 | -0.186 | 0.634 | -0.643 | 0.924 | -0.643 | -1.782 | 0.571 | 2.511 | -0.755 | -1.082 | -0.218 | -0.431 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eo6_A_91 | 1eo6 | A | 91 | 106 | MGQLYEKEKDEDGFLY | HHHHHHHH--TTS-EE | aaaaaaaapxaavbbb |
1gnu_A_91 | 1gnu | A | 91 | 106 | MGQLYQEHHEEDFFLY | HHHHHHHH--TTS-EE | aaaaaaaaxxaavbbb |
1set_A_386 | 1set | A | 388 | 403 | LAMLLENHQLQDGRVR | HHHHHHHHB-TTS-EE | aaaaaaaapbaavxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1set_A_386 | 1set | A | SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE | R - 386 |
1set_A_386 | 1set | A | SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE | I - 387 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gnu_A_91 | 1gnu | A | NINI BINDING SITE FOR CHAIN A | H - 99 |
Clusters included in this Subclass |
CLUSTER: HE.5.398 |