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Information on SUBCLASS 8.8.1
Subclass Accession number: 5972
Subclass: 8.8.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.11 (>75 %)  1.11.1 (>75 %)  1.11.1.14
GO : GO:0004601 (>75 %)  GO:0005525 (>75 %)  GO:0016684 (>75 %)  GO:0016690 (>75 %)  GO:0019001 (>75 %)  
SCOP : 48112 (>75 %)  48113 (>75 %)  48114 (>75 %)  52539 (>75 %)  52540 (>75 %)  52592 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 15.1 +/- 15.9
Average RMSD (Å) : 0.650 +/- 0.332

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XNpXXLXpXXhh
(φψ)-conformation: aapaaaaappbb
Pattern: [AST]xxxxx[ASV][FIL]x[NT]xx[EKTW][IL]x[DNT][ITV][PS][FIVW][ILVY][ILY]
Conservation:0.465-0.508-1.487-0.757-0.655-0.725-0.1570.602-0.5042.016-0.851-0.793-0.8511.668-1.0820.8040.6291.964-0.2150.1320.305
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_C_2651azs   C269289ALNLFKSIWNNRWLRTISVILHHHHHHHHHT-TT-SS--EEEaaaaaaaaaaxaaaaaxxbxx
1f6b_A_1081f6b   A111131SKEELDSLMTDETIANVPILIHHHHHHHHHT-GGGTTS-EEEaaaaaaaaaaxaaaaaxpbbx
1m2o_B_1061m2o   B109129ARVELDALFNIAELKDVPFVIHHHHHHHHHT-GGGTT--EEEaaaaaaaaaaxaaaaaxwbbx
1s9r_A_1841s9r   A184204TLFSRFVFSNHPKLINTPWYYHHHHHHHHHH-TTTTT--EEEaaaaaaaaaaxaaaaaxxbab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_C_2651azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE N - 292
1f6b_A_1081f6b   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 134
1m2o_B_1061m2o   B     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER N - 132

Clusters included in this Subclass
CLUSTER: HE.10.29
CLUSTER: HE.8.99