Information on SUBCLASS 2.1.2 |
Subclass Accession number: 60
Subclass: 2.1.2 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 12 Average sequence ID (%) : 15.6 +/- 2.0 Average RMSD (Å) : 0.40 +/- 0.30 Consensus geometry
|
Consensus Sequence: | XXpGpX |
(φψ)-conformation: | bbllbb |
Pattern: | x | x | x | [DENQRS] | {GL} | x | x |
Conservation: | -1.000 | -0.926 | -0.682 | 1.044 | 1.453 | -0.244 | -0.645 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16pk_*_29 | 16pk | - | 29 | 34 | .VKNGKI | .EETTEE | .bblvbx |
1byg_A_208 | 1byg | A | 212 | 218 | GDYRGNK | EEETTEE | bbblgxp |
1cke_A_69 | 1cke | A | 72 | 78 | VSTNGNL | EEETTEE | bbblvbx |
1cke_A_77 | 1cke | A | 80 | 86 | VILEGED | EEETTEE | bxblvbx |
1gky_*_67 | 1gky | - | 71 | 77 | AQFSGNY | EEETTEE | bbblvbb |
1hcl_*_66 | 1hcl | - | 70 | 76 | IHTENKL | EEETTEE | bbbllbb |
1p38_*_8 | 1p38 | - | 11 | 17 | QELNKTI | EEETTEE | bbblvbx |
1php_*_26 | 1php | - | 26 | 31 | .MEQGAI | .EETTEE | .bbvvbx |
1qpg_*_129 | 1qpg | - | 130 | 136 | RKVDGQK | EEETTEE | bxblgxx |
1vpe_*_26 | 1vpe | - | 26 | 31 | .VKDGVV | .EETTEE | .bblvbx |
2cmk_A_79 | 2cmk | A | 80 | 86 | VILEGED | EEETTEE | bbblvbx |
2src_*_392 | 2src | - | 394 | 400 | VGENLVC | EEGGGEE | bbpvlxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | E - 69 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | W - 70 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | A - 71 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | F - 73 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | Y - 78 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | G - 79 |
1gky_*_67 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | S - 80 |
Clusters included in this Subclass |
CLUSTER: HA.1.4 |
CLUSTER: HA.2.0 |