Information on SUBCLASS 2.2.14 |
Subclass Accession number: 6059
Subclass: 2.2.14 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 18.7 +/- 16.7 Average RMSD (Å) : 0.533 +/- 0.141 Consensus geometry
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Consensus Sequence: | XpXXGX |
(φψ)-conformation: | bbaaeb |
Pattern: | x | x | [ACGIKTV] | [AFGKLV] | x | [DGNST] | x | x | [G] | [cikltv] | x |
Conservation: | -0.250 | -0.287 | -0.454 | -0.472 | -0.499 | 0.365 | -0.531 | -0.289 | 2.924 | -0.285 | -0.222 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b6r_A_221 | 1b6r | A | 225 | 235 | MECFVTPQGLL | EEEEEETTEEE | bxbbxbaaexb |
1cs6_A_365 | 1cs6 | A | 368 | 378 | QCVAENKHGTV | EEEEEETTEEE | bbbbbbaaebb |
1ex0_A_155 | 1ex0 | A | 160 | 170 | YVAVWTPYGVL | EEEEEETTEEE | bbbbxbaaebx |
1g1c_A_75 | 1g1c | A | 78 | 88 | MVKAINIAGET | EEEEEETTEEE | bbbbbbaaebb |
1h0h_A_899 | 1h0h | A | 899 | 909 | KVILESVRGKL | EEEEEETTEEE | xbbbbbaaebb |
1lld_A_275 | 1lld | A | 278 | 288 | VPTLLNRQGVN | EEEEEETTEEE | bwbxbbaaebb |
1obb_A_389 | 1obb | A | 392 | 402 | VPALVDKNGIH | EEEEEETTEEE | bwbxbbaaexb |
1oxx_K_245 | 1oxx | K | 247 | 257 | LEGKVTNEGVV | EEEEEETTEEE | bbbxxbaaexx |
1r0p_A_1076 | 1r0p | A | 1082 | 1092 | EVIGRGHFGCV | EEEEEETTEEE | bxabbbaaebb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1obb_A_389 | 1obb | A | CSWCYSTEINE-S-DIOXIDE | E - 391 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | K - 250 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | T - 252 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | N - 253 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | E - 254 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | G - 255 |
1oxx_K_245 | 1oxx | K | IODIODIDE ION | V - 256 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | I - 1084 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | G - 1085 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | R - 1086 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | G - 1087 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | F - 1089 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | V - 1092 |
Clusters included in this Subclass |
CLUSTER: HA.1.74 |
CLUSTER: HA.3.71 |