Information on SUBCLASS 4.1.12 |
Subclass Accession number: 6247
Subclass: 4.1.12 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 12.2 +/- 13.9 Average RMSD (Å) : 0.975 +/- 0.365 Consensus geometry
|
Consensus Sequence: | XcXppcXX |
(φψ)-conformation: | bbaaalbb |
Pattern: | [AGILV] | x | x | x | x | x | [DEN] | x | [KNPQS] | [DEKT] | [DHKNQ] | x | x | x | x | x | x | x | x |
Conservation: | 0.356 | -0.360 | -0.715 | -0.742 | -0.523 | -0.244 | 3.489 | -0.850 | 0.759 | 0.788 | 0.909 | -0.098 | -0.501 | -0.662 | -0.581 | -0.168 | -0.022 | -0.325 | -0.509 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cru_A_112 | 1cru | A | 116 | 134 | IRRYTYNKSTDTLEKPVDL | EEEEEEETTTTEEEEEEEE | xbbbbxbaaalbbblwbxa |
1dxr_H_164 | 1dxr | H | 168 | 186 | VTDLWVDRSEHYFRYLELS | EEEEEEETTTTEEEEEEEE | xabbbbxaaavbxabbbbx |
1i7q_A_35 | 1i7q | A | 36 | 54 | LLLESAEINDKQNLQSLLV | EEEEEE-TTT--EEEEEEE | bbbbbbxaaavxxabbbbx |
1q67_A_34 | 1q67 | A | 44 | 62 | ASLYKWDFKKDEWNKLEYQ | EEEEEEETTTTEEEEEEEE | bbxbbxbaaalbxxxxabb |
1ry6_A_213 | 1ry6 | A | 216 | 234 | LNIDLKDINKNTSLGKIAF | EEEEEEETTTTEEEEEEEE | bxbbxbxaaalbxaebbbb |
1rzh_H_160 | 1rzh | H | 164 | 182 | VVDIWVDIPEQMARFLEVE | EEEEEEETTTTEEEEEEEE | xabbxbxaaalbxabbxbx |
1uca_A_148 | 1uca | A | 148 | 166 | GLRCRTDPQTKVSYLVQVV | EEEEEE-TTT--EEEEEEE | bbbbbxxaaavxxbxabbb |
1ugi_A_41 | 1ugi | A | 42 | 60 | LVHTAYDESTDENVMLLTS | EEEEEEETTTTEEEEEEEE | bbbeMxbaaalbbbbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cru_A_112 | 1cru | A | GOLGLYCEROL | D - 126 |
Clusters included in this Subclass |
CLUSTER: HA.5.86 |