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Information on SUBCLASS 4.1.12
Subclass Accession number: 6247
Subclass: 4.1.12 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 12.2 +/- 13.9
Average RMSD (Å) : 0.975 +/- 0.365

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XcXppcXX
(φψ)-conformation: bbaaalbb
Pattern: [AGILV]xxxxx[DEN]x[KNPQS][DEKT][DHKNQ]xxxxxxxx
Conservation:0.356-0.360-0.715-0.742-0.523-0.2443.489-0.8500.7590.7880.909-0.098-0.501-0.662-0.581-0.168-0.022-0.325-0.509
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cru_A_1121cru   A116134IRRYTYNKSTDTLEKPVDLEEEEEEETTTTEEEEEEEExbbbbxbaaalbbblwbxa
1dxr_H_1641dxr   H168186VTDLWVDRSEHYFRYLELSEEEEEEETTTTEEEEEEEExabbbbxaaavbxabbbbx
1i7q_A_351i7q   A3654LLLESAEINDKQNLQSLLVEEEEEE-TTT--EEEEEEEbbbbbbxaaavxxabbbbx
1q67_A_341q67   A4462ASLYKWDFKKDEWNKLEYQEEEEEEETTTTEEEEEEEEbbxbbxbaaalbxxxxabb
1ry6_A_2131ry6   A216234LNIDLKDINKNTSLGKIAFEEEEEEETTTTEEEEEEEEbxbbxbxaaalbxaebbbb
1rzh_H_1601rzh   H164182VVDIWVDIPEQMARFLEVEEEEEEEETTTTEEEEEEEExabbxbxaaalbxabbxbx
1uca_A_1481uca   A148166GLRCRTDPQTKVSYLVQVVEEEEEE-TTT--EEEEEEEbbbbbxxaaavxxbxabbb
1ugi_A_411ugi   A4260LVHTAYDESTDENVMLLTSEEEEEEETTTTEEEEEEEEbbbeMxbaaalbbbbxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cru_A_1121cru   A     GOLGLYCEROL D - 126

Clusters included in this Subclass
CLUSTER: HA.5.86