Information on SUBCLASS 6.10.1 |
Subclass Accession number: 6442
Subclass: 6.10.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 7.0 +/- 9.3 Average RMSD (Å) : 0.918 +/- 0.440 Consensus geometry
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Consensus Sequence: | hXXXXXXXXX |
(φψ)-conformation: | bbpabglpbb |
Pattern: | [cehrsty] | [acgilv] | x | x | [afgikm] | x | x | [ADGKNRST] | x | x | x | x |
Conservation: | -0.793 | -0.993 | 0.026 | 1.319 | -1.455 | -0.118 | 0.964 | 1.711 | 0.615 | -1.109 | -0.216 | 0.048 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alq_*_230 | 1alq | - | 235 | 246 | SGQAITYASRND | EEE-SSTT-EEE | xbbxabllxbbb |
1bfg_*_21 | 1bfg | - | 22 | 33 | RLYCKNGGFFLR | EEEETTTTEEEE | bbxxaxgvxxxb |
1cr9_H_88 | 1cr9 | H | 91 | 101 | YCNADLHDYWG. | EEEETTTTEEE. | bbbbabllxbx. |
1eag_A_261 | 1eag | A | 262 | 273 | VVFNFSKNAKIS | EEEE-STT-EEE | bbbbabllxbbb |
1f1u_A_241 | 1f1u | A | 245 | 256 | PGRHGVSNAFYL | EEE-STT--EEE | wbbxaxvvxxbb |
1hh2_P_294 | 1hh2 | P | 296 | 307 | EILDKENKAARV | EEEETTTTEEEE | bxababNlbbbb |
1k32_A_477 | 1k32 | A | 481 | 492 | HVYDMEGRKIFA | EEEETTTTEEEE | bbbxaxglbbbx |
1k8k_A_254 | 1k8k | A | 257 | 268 | TGINAISKKEFS | EEE-TTT--EEE | bbbxabglbxbb |
1nez_A_93 | 1nez | A | 101 | 112 | CEVEFFGSLFRA | EEEETTTTEEEE | bbbbaxvlxbbb |
1tgo_A_431 | 1tgo | A | 431 | 442 | YDVAPQVGHKFC | EEE-TTT--EEE | bbbxabvlxbbx |
1ub6_B_197 | 1ub6 | B | 200 | 211 | EATHKTSTSPIV | EE-BSSSSS-EE | bbxxabgvbxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f1u_A_241 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | H - 248 |
1f1u_A_241 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | S - 251 |
1f1u_A_241 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | Y - 257 |
Clusters included in this Subclass |
CLUSTER: HA.4.105 |
CLUSTER: HA.5.195 |
CLUSTER: HA.6.92 |
CLUSTER: HA.7.131 |