Information on SUBCLASS 14.3.1 |
Subclass Accession number: 6605
Subclass: 14.3.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 1.14 (>50 %) 1.14.13 (>50 %) 1.14.13.393.4.21 (>75 %) GO : GO:0004252 (>75 %) GO:0004497 (>75 %) GO:0004517 (>75 %) GO:0005489 (>50 %) GO:0005509 (>75 %) GO:0005515 (>50 %) GO:0005516 (>50 %) GO:0008236 (>75 %) GO:0010181 (>50 %) GO:0016705 (>75 %) GO:0016709 (>75 %) GO:0048037 (>50 %) GO:0050662 (>50 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) 56511 (>75 %) 56512 (>75 %) 56513 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 58.7 +/- 22.0 Average RMSD (Å) : 0.250 +/- 0.084 Consensus geometry
|
Consensus Sequence: | VhhpHPphphFppLXLKW |
(φψ)-conformation: | bppbbaapaaaaaalpbb |
Pattern: | [E] | [V] | [APT] | [ILM] | [ERT] | [H] | [NP] | [DHKT] | [FILY] | [DEP] | [kw] | [FL] | [AKQRS] | [ADEK] | [L] | [EGN] | [L] | [KR] | [W] | [Y] |
Conservation: | 0.596 | 0.217 | -0.563 | -0.338 | -0.739 | 1.734 | -0.174 | -1.051 | -0.596 | -0.482 | -0.731 | -0.096 | -0.898 | -0.874 | 0.217 | -0.770 | 0.217 | 0.104 | 2.872 | 1.355 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jwk_A_322 | 1jwk | A | 322 | 341 | EVTMEHPKYEWFQELGLKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaavxbbx |
1m7v_A_190 | 1m7v | A | 190 | 209 | EVPITHPDIEAFSDLELKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaalxbbx |
1mjt_A_181 | 1mjt | A | 181 | 200 | EVPIEHNHYPKLRKLNLKWY | EEE---TT-GGGGGG--EEE | bbxxbbaabaaaaaalxbbx |
1om4_A_543 | 1om4 | A | 543 | 562 | EVPIRHPKFDWFKDLGLKWY | EEE---SS-TTGGGG--EEE | bbxxbxaNxaaaaaavxbbx |
1q2o_A_314 | 1q2o | A | 314 | 333 | EVPLEHPTLEWFAALGLRWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaavxbbx |
4nos_A_328 | 4nos | A | 328 | 347 | EVAMEHPKYEWFRELELKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaalbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jwk_A_322 | 1jwk | A | EGLETHYLENE GLYCOL | P - 328 |
1m7v_A_190 | 1m7v | A | ARGARGININE | W - 208 |
1m7v_A_190 | 1m7v | A | ARGARGININE | Y - 209 |
1om4_A_543 | 1om4 | A | ARGARGININE | W - 561 |
1om4_A_543 | 1om4 | A | ARGARGININE | Y - 562 |
1q2o_A_314 | 1q2o | A | CACCACODYLATE ION | W - 324 |
1q2o_A_314 | 1q2o | A | CACCACODYLATE ION | F - 325 |
1q2o_A_314 | 1q2o | A | CACCACODYLATE ION | A - 327 |
1q2o_A_314 | 1q2o | A | CACCACODYLATE ION | L - 328 |
1q2o_A_314 | 1q2o | A | DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE | Y - 333 |
Clusters included in this Subclass |
CLUSTER: HA.13.5 |