Information on SUBCLASS 9.2.1 |
Subclass Accession number: 6892
Subclass: 9.2.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 42.9 +/- 25.6 Average RMSD (Å) : 0.980 +/- 0.192 Consensus geometry
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Consensus Sequence: | VTAhHChpXchph |
(φψ)-conformation: | bbpaaapppgpbb |
Pattern: | [GW] | [FIV] | [LV] | [ST] | [A] | [AG] | [H] | [C] | [givy] | [EKT] | [PSTV] | [GN] | [AILV] | [KQT] | [AIV] | [rt] | [ILV] |
Conservation: | 0.746 | -0.330 | -0.060 | 0.145 | 0.445 | -0.186 | 2.076 | 2.484 | -1.350 | -0.550 | -0.883 | 0.037 | -0.556 | -0.550 | -0.389 | -0.953 | -0.125 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hj9_A_51 | 1hj9 | A | 51 | 67 | WVVSAAHCYKSGIQVRL | EEEE-GGG--SS-EEEE | bbxbxaaapbxvxbxbb |
1lo6_A_51 | 1lo6 | A | 51 | 67 | WVLTAAHCKKPNLQVFL | EEEE-GGG--TT-EEEE | bbxbxaaaxbxvxbbbb |
1pfx_C_51 | 1pfx | C | 51 | 67 | WVVTAAHCIEPGVKITV | EEEE-GGG--TT---EE | bbbbxaaaxxpvbxbbx |
1qq4_A_28 | 1qq4 | A | 30 | 46 | GFVTAGHCGTVNATARI | EEEE-GGG--TT-EEEE | bbxbxaaabxpvxxxbb |
1rfn_A_51 | 1rfn | A | 51 | 67 | WIVTAAHCVETGVKITV | EEEE-GGG--TT---EE | bbbbxaaabxpgpxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hj9_A_51 | 1hj9 | A | ANLANILINE | H - 57 |
1lo6_A_51 | 1lo6 | A | BENBENZAMIDINE | H - 57 |
1qq4_A_28 | 1qq4 | A | GOLGLYCEROL | G - 35 |
1qq4_A_28 | 1qq4 | A | GOLGLYCEROL | H - 36 |
1qq4_A_28 | 1qq4 | A | GOLGLYCEROL | C - 37 |
1qq4_A_28 | 1qq4 | A | GOLGLYCEROL | G - 38 |
1qq4_A_28 | 1qq4 | A | GOLGLYCEROL | T - 39 |
1rfn_A_51 | 1rfn | A | PBZP-AMINO BENZAMIDINE | H - 57 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hj9_A_51 | 1hj9 | A | S43SO4 BINDING SITE FOR RESIDUE A248 | H - 57 |
Clusters included in this Subclass |
CLUSTER: AR.10.4 |