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Information on SUBCLASS 4.28.1
Subclass Accession number: 7393
Subclass: 4.28.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 35.4 +/- 27.1
Average RMSD (Å) : 0.357 +/- 0.151

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXGXhXhc
(φψ)-conformation: bbSlpbaa
Pattern: [IPV][ilt][lvy][ADGS][G][GS][LV][gnt][AGPT][ADEGK][N][ACI]x[EKPST][ALV][AIY]
Conservation:-0.105-0.681-0.604-0.2922.3390.4540.419-0.382-0.602-0.7312.3390.130-1.024-0.565-0.140-0.555
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1geh_A_3631geh   A364379PTSSGGLHPGNIQPVIEEEESS--TTTHHHHHxbbbNvbbaaaaaaaa
1kv5_A_2081kv5   A208223ILYGGSVNGKNARTLYEEEESS--TTTHHHHHbxxbSvxbaaaaaaaa
1lyx_A_2061lyx   A206221ILYGGSVNTENCSSLIEEEESS--TTTHHHHHbbbbSlxbaaaaaaaa
1n55_A_2071n55   A208223ILYGGSVNAANAATLYEEEESS--TTTHHHHHbxbbSvxbaaaaaaaa
1pii_*_4021pii   -402417VLLAGGLGADNCVEAAEEEESS--TTTHHHHHbbxbSvxbaaaaaaaa
1rpx_C_1811rpx   C182197IEVDGGVGPKNAYKVIEEEESS--TTTHHHHHbxbbSvxbaaNaaaaa
1tph_1_2061tph   1206221IIYGGSVTGGNCKELAEEEESS--TTTHHHHHbbbbSlxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID G - 211
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID G - 212
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID S - 213
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID V - 214
1lyx_A_2061lyx   A     PGA2-PHOSPHOGLYCOLIC ACID G - 209
1lyx_A_2061lyx   A     PGA2-PHOSPHOGLYCOLIC ACID G - 210
1lyx_A_2061lyx   A     PGA2-PHOSPHOGLYCOLIC ACID S - 211
1lyx_A_2061lyx   A     PGA2-PHOSPHOGLYCOLIC ACID V - 212
1pii_*_4021pii   *     PO4PHOSPHATE ION A - 405
1pii_*_4021pii   *     PO4PHOSPHATE ION G - 406
1pii_*_4021pii   *     PO4PHOSPHATE ION G - 407
1pii_*_4021pii   *     PO4PHOSPHATE ION L - 408
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID G - 209
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID G - 210
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID S - 211
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID V - 212

Clusters included in this Subclass
CLUSTER: EH.6.38