Information on SUBCLASS 5.16.1 |
Subclass Accession number: 740
Subclass: 5.16.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005524 (>75 %) GO:0017076 (>75 %) GO:0030554 (>75 %) SCOP : 57015 (>75 %) 57196 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 19.5 +/- 17.8 Average RMSD (Å) : 0.550 +/- 0.447 Consensus geometry
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Consensus Sequence: | XXGXphXph |
(φψ)-conformation: | bbeaalabb |
Pattern: | x | x | x | [astv] | [G] | x | [dkrsy] | [CGL] | [DEGNS] | [ehqrtw] | [ACFIK] |
Conservation: | -1.000 | -1.000 | -0.445 | -0.218 | 2.264 | -0.869 | -0.619 | 0.961 | -0.043 | -0.650 | -0.380 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ezv_E_167 | 1ezv | E | 167 | 177 | IGEAGDFGGWF | EET-STTSSEE | xxlbeaavFbb |
1g1t_A_148 | 1g1t | A | 148 | 156 | ..FSGLKCEQI | ..EESTTS-EE | ..bbeaalabx |
1k32_A_92 | 1k32 | A | 96 | 106 | RVMRGSSLNTA | EEEESTT--EE | bbbbMaalabb |
1klo_*_149 | 1klo | - | 149 | 157 | ..VSGRDCGTC | ..EESTT--EE | ..bbeaalabx |
1klo_*_37 | 1klo | - | 37 | 45 | ..TAGKRCELC | ..EESTTS-EE | ..bbeaalabx |
1klo_*_94 | 1klo | - | 94 | 102 | ..TAGFYCDRC | ..EETTTT-EE | ..xbeaalabb |
1lk9_A_45 | 1lk9 | A | 45 | 53 | ..YTGPDCSEK | ..EESTTS-EE | ..bbeaalaxx |
1mox_C_38 | 1mox | C | 38 | 46 | ..YVGARCEHA | ..EESTTS-EE | ..bbeaalabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ezv_E_167 | 1ezv | E | FESFE2/S2 (INORGANIC) CLUSTER | C - 178 |
1mox_C_38 | 1mox | C | CDCADMIUM ION | Y - 38 |
1mox_C_38 | 1mox | C | PTPLATINUM (II) ION | V - 39 |
1mox_C_38 | 1mox | C | NAGN-ACETYL-D-GLUCOSAMINE | R - 42 |
Clusters included in this Subclass |
CLUSTER: HA.6.26 |