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Information on SUBCLASS 5.55.1
Subclass Accession number: 7517
Subclass: 5.55.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 27.5 +/- 17.3
Average RMSD (Å) : 0.433 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: phhXhXGhh
(φψ)-conformation: bplaealaa
Pattern: [KR][FV][IL][DE][LP][AFG][ACT][AG]x[G][GPV][FL]xx[A][AFL][ER]
Conservation:0.866-0.1640.5311.092-0.670-0.964-0.2760.426-1.1022.338-1.1700.475-1.033-0.8951.100-0.8260.270
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g38_A_421g38   A4258RVLEPACAHGPFLRAFREEEEET-TT-HHHHHHHxbbbxlaeavaaaaaaa
1ufk_A_1231ufk   A123139KVLDLGTGSGVLAIAAEEEEEET-TT-HHHHHHHxbbbxvaeavaaaaaaa
6mht_A_136mht   A1329RFIDLFAGLGGFRLALEEEEEET-TT-HHHHHHHbbbbxlaeavaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE E - 45
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE P - 46
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE A - 47
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE C - 48
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE A - 49
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE P - 52
1g38_A_421g38   A     NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE F - 53
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE L - 17
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE F - 18
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE A - 19
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE G - 20
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE L - 21
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE G - 22
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE G - 23
6mht_A_136mht   A     SAMS-ADENOSYLMETHIONINE F - 24

Clusters included in this Subclass
CLUSTER: EH.4.264