Information on SUBCLASS 5.55.1 |
Subclass Accession number: 7517
Subclass: 5.55.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 27.5 +/- 17.3 Average RMSD (Å) : 0.433 +/- 0.115 Consensus geometry
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Consensus Sequence: | phhXhXGhh |
(φψ)-conformation: | bplaealaa |
Pattern: | [KR] | [FV] | [IL] | [DE] | [LP] | [AFG] | [ACT] | [AG] | x | [G] | [GPV] | [FL] | x | x | [A] | [AFL] | [ER] |
Conservation: | 0.866 | -0.164 | 0.531 | 1.092 | -0.670 | -0.964 | -0.276 | 0.426 | -1.102 | 2.338 | -1.170 | 0.475 | -1.033 | -0.895 | 1.100 | -0.826 | 0.270 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g38_A_42 | 1g38 | A | 42 | 58 | RVLEPACAHGPFLRAFR | EEEEET-TT-HHHHHHH | xbbbxlaeavaaaaaaa |
1ufk_A_123 | 1ufk | A | 123 | 139 | KVLDLGTGSGVLAIAAE | EEEEET-TT-HHHHHHH | xbbbxvaeavaaaaaaa |
6mht_A_13 | 6mht | A | 13 | 29 | RFIDLFAGLGGFRLALE | EEEEET-TT-HHHHHHH | bbbbxlaeavaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | E - 45 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | P - 46 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | A - 47 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | C - 48 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | A - 49 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | P - 52 |
1g38_A_42 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | F - 53 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | L - 17 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | F - 18 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | A - 19 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | G - 20 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | L - 21 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | G - 22 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | G - 23 |
6mht_A_13 | 6mht | A | SAMS-ADENOSYLMETHIONINE | F - 24 |
Clusters included in this Subclass |
CLUSTER: EH.4.264 |