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Information on SUBCLASS 2.4.13
Subclass Accession number: 7807
Subclass: 2.4.13 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 19.3 +/- 17.7
Average RMSD (Å) : 0.800 +/- 0.265

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXpXpX
(φψ)-conformation: bbllbb
Pattern: [FP][HL][ILV][FTV][EHK][KTV][ERS][GS][KRT]x[FHI]x[CTV][G][GIV][FI]x[VW][GR]
Conservation:-0.143-0.4820.590-0.7370.059-0.826-0.4720.888-0.206-0.321-0.649-0.914-0.2953.243-1.0020.385-0.5711.2820.172
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dle_A_1981dle   A198216PLIVHKRSRFIQVGVISWGEEEE--SS--EEEEEEEEExxbbxxlvbbbxabbpabb
1euf_A_301euf   A3250FLLFKTSGKSHICGGFLVREEEEESSSSEEEEEEEEEEbxbbbbllbxbbbxbbxab
1rfn_A_1981rfn   A198216PHVTEVEGTSFLTGIISWGEEEEESSS-EEEEEEEEEExbbbxblvbxbxabbpabe
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1euf_A_301euf   A     NAGN-ACETYL-D-GLUCOSAMINE L - 34
1euf_A_301euf   A     NAGN-ACETYL-D-GLUCOSAMINE F - 35
1euf_A_301euf   A     NAGN-ACETYL-D-GLUCOSAMINE K - 36
1euf_A_301euf   A     NAGN-ACETYL-D-GLUCOSAMINE S - 38
1rfn_A_1981rfn   A     PBZP-AMINO BENZAMIDINE I - 213
1rfn_A_1981rfn   A     PBZP-AMINO BENZAMIDINE S - 214
1rfn_A_1981rfn   A     PBZP-AMINO BENZAMIDINE W - 215
1rfn_A_1981rfn   A     PBZP-AMINO BENZAMIDINE G - 216

Clusters included in this Subclass
CLUSTER: HA.5.125