Information on SUBCLASS 2.4.13 |
Subclass Accession number: 7807
Subclass: 2.4.13 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.3 +/- 17.7 Average RMSD (Å) : 0.800 +/- 0.265 Consensus geometry
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Consensus Sequence: | pXpXpX |
(φψ)-conformation: | bbllbb |
Pattern: | [FP] | [HL] | [ILV] | [FTV] | [EHK] | [KTV] | [ERS] | [GS] | [KRT] | x | [FHI] | x | [CTV] | [G] | [GIV] | [FI] | x | [VW] | [GR] |
Conservation: | -0.143 | -0.482 | 0.590 | -0.737 | 0.059 | -0.826 | -0.472 | 0.888 | -0.206 | -0.321 | -0.649 | -0.914 | -0.295 | 3.243 | -1.002 | 0.385 | -0.571 | 1.282 | 0.172 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dle_A_198 | 1dle | A | 198 | 216 | PLIVHKRSRFIQVGVISWG | EEEE--SS--EEEEEEEEE | xxbbxxlvbbbxabbpabb |
1euf_A_30 | 1euf | A | 32 | 50 | FLLFKTSGKSHICGGFLVR | EEEEESSSSEEEEEEEEEE | bxbbbbllbxbbbxbbxab |
1rfn_A_198 | 1rfn | A | 198 | 216 | PHVTEVEGTSFLTGIISWG | EEEEESSS-EEEEEEEEEE | xbbbxblvbxbxabbpabe |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1euf_A_30 | 1euf | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 34 |
1euf_A_30 | 1euf | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 35 |
1euf_A_30 | 1euf | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 36 |
1euf_A_30 | 1euf | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 38 |
1rfn_A_198 | 1rfn | A | PBZP-AMINO BENZAMIDINE | I - 213 |
1rfn_A_198 | 1rfn | A | PBZP-AMINO BENZAMIDINE | S - 214 |
1rfn_A_198 | 1rfn | A | PBZP-AMINO BENZAMIDINE | W - 215 |
1rfn_A_198 | 1rfn | A | PBZP-AMINO BENZAMIDINE | G - 216 |
Clusters included in this Subclass |
CLUSTER: HA.5.125 |