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Information on SUBCLASS 5.11.1
Subclass Accession number: 7949
Subclass: 5.11.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 11.0 +/- 17.4
Average RMSD (Å) : 1.000 +/- 0.141

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXXpXph
(φψ)-conformation: bbaabppbb
Pattern: x[cewy][dgv]x[cdg]x[DEGST][acstv][DKNRST][nwy][ADERS][fwy]x
Conservation:-0.2770.574-0.928-1.016-0.261-0.8750.450-0.1570.462-0.1190.4812.676-1.009
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1djx_A_6991djx   A704716VEDYDSSSKNDFIEEE--SSS--EEEbbxxbaabxxxxa
1dsy_A_2391dsy   A244256IWDWDRTTRNDFMEEE--SSS--EEEbbbxbaabxxbxa
1g9g_A_3011g9g   A301313AWGGGIDSTWSWIEEEEESSS--EEEbbbbxaabxbbbb
1l1y_A_3291l1y   A329341AWGGGIGASWAWKEEEEESSS--EEEbbbbxaaxxbbbb
1m2k_A_1171m2k   A120132RVVRCTSCNNSFEEEEEESSSS-EEEabbbxaaxxbbbb
1nb8_A_3301nb8   A330342SYIQCKEVDYRSDEEEEESSS--EEEbbbbxaaxxbbbb
1ryp_I_1731ryp   I175187VCVMEIGKDAEYLEEEEETTS--EEEbbbbbaabxxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1djx_A_6991djx   A     ACTACETATE ION R - 701
1djx_A_6991djx   A     ACTACETATE ION M - 703
1djx_A_6991djx   A     CACALCIUM ION D - 706
1djx_A_6991djx   A     ACTACETATE ION F - 715
1djx_A_6991djx   A     ACTACETATE ION Q - 718
1dsy_A_2391dsy   A     PO4PHOSPHATE ION W - 245
1dsy_A_2391dsy   A     CACALCIUM ION D - 246
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE D - 246
1dsy_A_2391dsy   A     CACALCIUM ION W - 247
1dsy_A_2391dsy   A     PO4PHOSPHATE ION W - 247
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE W - 247
1dsy_A_2391dsy   A     CACALCIUM ION D - 248
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE D - 248
1dsy_A_2391dsy   A     CACALCIUM ION R - 249
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE R - 249
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE T - 250
1dsy_A_2391dsy   A     CACALCIUM ION T - 251
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE T - 251
1dsy_A_2391dsy   A     CACALCIUM ION R - 252
1dsy_A_2391dsy   A     CACALCIUM ION N - 253
1dsy_A_2391dsy   A     PO4PHOSPHATE ION N - 253
1dsy_A_2391dsy   A     CACALCIUM ION D - 254
1dsy_A_2391dsy   A     PSF1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE D - 254
1m2k_A_1171m2k   A     ZNZINC ION C - 124
1m2k_A_1171m2k   A     ZNZINC ION T - 125
1m2k_A_1171m2k   A     ZNZINC ION S - 126
1m2k_A_1171m2k   A     ZNZINC ION C - 127
1m2k_A_1171m2k   A     ZNZINC ION N - 128
1m2k_A_1171m2k   A     ZNZINC ION N - 129
1nb8_A_3301nb8   A     MSESELENOMETHIONINE S - 330
1nb8_A_3301nb8   A     MSESELENOMETHIONINE R - 343

Clusters included in this Subclass
CLUSTER: HA.4.59
CLUSTER: HA.6.27