Information on SUBCLASS 8.12.1 |
Subclass Accession number: 8019
Subclass: 8.12.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 66.7 +/- -13.4 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry
|
Consensus Sequence: | pDhTGNRSpXVX |
(φψ)-conformation: | bpaalabappbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -1.465 | 0.383 | 0.383 | 1.306 | -0.910 | 0.567 | 1.306 | 1.306 | 0.567 | -0.172 | -0.356 | -1.280 | -0.172 | -1.465 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e43_A_448 | 1e43 | A | 448 | 461 | TWHDITGNRSEPVV | EEEETTSS----EE | xbbxaavabaxxbx |
1hvx_A_448 | 1hvx | A | 448 | 461 | VFYDLTGNRSDTVT | EEEETTSS---EEE | bbbxaavabaxbbb |
1vjs_*_448 | 1vjs | - | 448 | 461 | TWHDITGNRSEPVV | EEEETTSS--S-EE | bbbxaavabaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e43_A_448 | 1e43 | A | CACALCIUM ION | W - 449 |
Clusters included in this Subclass |
CLUSTER: HA.7.30 |