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Information on SUBCLASS 2.7.8
Subclass Accession number: 8278
Subclass: 2.7.8 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 3.3 +/- 6.2
Average RMSD (Å) : 0.825 +/- 0.189

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XphhhX
(φψ)-conformation: aabpbb
Pattern: xxx[EKS][FMVY]x[AGLV]xxx
Conservation:-0.5250.077-0.5252.0291.2800.449-0.439-0.353-1.298-0.696
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bx4_A_461bx4   A5261LVKKFKVEYHHHHHS--EEEaaaabxbbbb
1dsy_A_2631dsy   A265274ELMKMPASGWHHHHS-EEEEaaaabxbbex
1gz0_A_1451gz0   A145154AAESVPLIRVHHHHS-EEEEaaaabxbbxb
1ivh_A_1141ivh   A125134ISGEYIGALAHHTSS-EEEEaavabbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bx4_A_461bx4   A     ADNADENOSINE A - 62
1bx4_A_461bx4   A     ADNADENOSINE G - 63
1ivh_A_1141ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 132
1ivh_A_1141ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 133
1ivh_A_1141ivh   A     COSCOENZYME A PERSULFIDE L - 133
1ivh_A_1141ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 134

Clusters included in this Subclass
CLUSTER: HE.3.87