Information on SUBCLASS 5.12.3 |
Subclass Accession number: 8587
Subclass: 5.12.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.9 +/- 13.3 Average RMSD (Å) : 0.667 +/- 0.115 Consensus geometry
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Consensus Sequence: | XphhPppXh |
(φψ)-conformation: | aappaaabb |
Pattern: | x | [IVW] | x | x | [ERY] | [AIL] | [AP] | [P] | [DE] | [KST] | [FKW] | [GLV] |
Conservation: | -0.581 | -0.232 | -0.872 | -0.465 | -0.465 | -0.290 | 0.586 | 2.675 | 0.980 | -0.174 | -0.290 | -0.872 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jqo_A_509 | 1jqo | A | 519 | 530 | HVLAELPPDSFG | HHHHHS-STTEE | aaaaaxxaaabb |
1kbi_A_70 | 1kbi | A | 70 | 81 | VIDKYIAPEKKL | HHHHHS-GGGEE | aaaaabxaaaxa |
1rhs_*_274 | 1rhs | - | 277 | 288 | EWFHRAPPETWV | HHHHHS-GGGEE | aaaaaxxaaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kbi_A_70 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 70 |
1kbi_A_70 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 71 |
1kbi_A_70 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 74 |
1kbi_A_70 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 75 |
1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | S - 274 |
1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | W - 275 |
1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | F - 276 |
Clusters included in this Subclass |
CLUSTER: HE.4.329 |